RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DPM1O60762 260 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF4O60810 478 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF11O60813 436 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 USP12O75317 370 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLC43A1O75387 559 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 HAUS5O94927 633 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 VAMP5O95183 116 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LYPLA2O95372 231 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PGK1P00558 417 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 GH1P01241 217 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CSF1RP07333 972 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 HMBSP08397 361 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 FAM228BP0C875 321 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 MYL6BP14649 208 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CD19P15391 556 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF26P17031 533 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF28P17035 718 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CEBPBP17676 345 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LBPP18428 481 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 S100PP25815 95 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SERPINA4P29622 427 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CHRNA5P30532 468 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OTX1P32242 354 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 FDFT1P37268 417 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 GRIA1P42261 906 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLCO1A2P46721 670 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PTDSS1P48651 473 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ARRB1P49407 418 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 FLT3LGP49771 235 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PGDP52209 483 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PNLIPRP2P54317 469 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TIRAPP58753 221 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PSME3P61289 254 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 MAGOHP61326 146 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ATP6V0D1P61421 351 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ERVS71-1P61550 626 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TXNL4AP83876 142 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 IL9RQ01113 521 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZFP36L1Q07352 338 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 FOXM1Q08050 763 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 DSC1Q08554 894 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TDGQ13569 410 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 RAB32Q13637 225 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 HLXQ14774 488 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TOMM34Q15785 309 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLC18A3Q16572 532 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 MAN2A1Q16706 1144 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ME3Q16798 604 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC36Q1X8D7 754 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 C18orf21Q32NC0 220 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 EDRF1Q3B7T1 1238 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PTCHD3Q3KNS1 767 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 IFI44LQ53G44 452 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF766Q5HY98 468 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 EPHA10Q5JZY3 1008 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LDLRAP1Q5SW96 308 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ANKS6Q68DC2 871 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 KCTD16Q68DU8 428 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLC9A4Q6AI14 798 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TIGD3Q6B0B8 471 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 FRMPD2BQ6IN97 320 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TCEAL6Q6IPX3 200 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ESRP1Q6NXG1 681 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM220Q6QAJ8 160 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 GLB1LQ6UWU2 654 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CLEC18BQ6UXF7 455 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZBTB49Q6ZSB9 765 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PEX26Q7Z412 305 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 POLNQ7Z5Q5 900 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 GRASPQ7Z6J2 395 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SETD3Q86TU7 594 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ANKRD46Q86W74 232 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLC26A11Q86WA9 606 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ARHGAP12Q8IWW6 846 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZZZ3Q8IYH5 903 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ADGRF4Q8IZF3 695 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 GCNT2Q8N0V5 402 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC75A-AS1Q8N1F1 130 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LNX2Q8N448 690 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CISD2Q8N5K1 135 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CCDC185Q8N715 623 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 RNF148Q8N7C7 305 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ACBD4Q8NC06 268 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CLEC18CQ8NCF0 446 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLC17A8Q8NDX2 589 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM185AQ8NFB2 350 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR2L5Q8NG80 312 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR10H4Q8NGA5 316 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR52N2Q8NGI0 321 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR4A15Q8NGL6 344 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR2L8Q8NGY9 312 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR6X1Q8NH79 312 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 RNASE11Q8TAA1 199 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OCC1Q8TAD7 63 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TBC1D15Q8TC07 691 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 MRGPRDQ8TDS7 321 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OIT3Q8WWZ8 545 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SLCO2A1Q92959 643 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 NKD2Q969F2 451 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms