RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	ALB	P02768	609 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	RAB40AL	P0C0E4	278 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ITGAX	P20702	1163 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	SERPINB3	P29508	390 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ARRB2	P32121	409 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	SSR2	P43308	183 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	HTR6	P50406	440 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	MTTP	P55157	894 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	BTN3A2	P78410	334 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	OCA2	Q04671	838 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	DNASE1L3	Q13609	305 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	SLC9A5	Q14940	896 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ABRAXAS2	Q15018	415 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	NCF4	Q15080	339 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	TGIF1	Q15583	401 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	MLIP	Q5VWP3	458 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	CES4A	Q5XG92	561 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ABHD17C	Q6PCB6	329 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	FAM199X	Q6PEV8	388 aa	Predicted RBP	12.47	□□□□□ -0.41
SF1-206	ENST00000413725	FAM198B	Q6UWH4	519 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	OVCH1	Q7RTY7	1134 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	PRSS41	Q7RTY9	318 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	PDSS2	Q86YH6	399 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF75CP	Q92670	426 aa	Predicted RBP	12.47	□□□□□ -0.41
SF1-206	ENST00000413725	SERINC2	Q96SA4	455 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	HBEGF	Q99075	208 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	YIPF2	Q9BWQ6	316 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	GPR87	Q9BY21	358 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.47	□□□□□ -0.41
SF1-206	ENST00000413725	VPS29	Q9UBQ0	182 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF282	Q9UDV7	671 aa	Predicted RBP	12.47	□□□□□ -0.41
SF1-206	ENST00000413725	ZDHHC2	Q9UIJ5	367 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	KCND3	Q9UK17	655 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	MAP4K5	Q9Y4K4	846 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	LOC101059948	A0A1B0GTJ6	334 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF860	A6NHJ4	632 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	C4orf51	C9J302	202 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	SLC28A1	O00337	649 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	SAP18	O00422	153 aa	Known RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	PLPP1	O14494	284 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	KLK10	O43240	276 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	RGS14	O43566	566 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	SNN	O75324	88 aa	Predicted RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	ETHE1	O95571	254 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	CAPNS1	P04632	268 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	EIF2S3	P41091	472 aa	Known RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	RPL14	P50914	215 aa	Known RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	SNRPN	P63162	240 aa	Known RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	FAM219B	Q5XKK7	198 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	OR4C11	Q6IEV9	310 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	LCN10	Q6JVE6	187 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	SCIMP	Q6UWF3	145 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	LRRC69	Q6ZNQ3	347 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	RNF165	Q6ZSG1	346 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	COX15	Q7KZN9	410 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	PAGE2	Q7Z2X7	111 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	TRIM46	Q7Z4K8	759 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	NUDT13	Q86X67	352 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	DDIAS	Q8IXT1	998 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF781	Q8N8C0	355 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	AMER3	Q8N944	861 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	FAM76A	Q8TAV0	307 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	TWIST2	Q8WVJ9	160 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	QRFPR	Q96P65	431 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	DCBLD2	Q96PD2	775 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	SORT1	Q99523	831 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	NPL	Q9BXD5	320 aa	Predicted RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	ACPT	Q9BZG2	426 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	C20orf27	Q9GZN8	174 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	MKKS	Q9NPJ1	570 aa	Predicted RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	HCN3	Q9P1Z3	774 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	TRPC4	Q9UBN4	977 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	HAO1	Q9UJM8	370 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	NXT1	Q9UKK6	140 aa	Known RBP	12.46	□□□□□ -0.41
SF1-206	ENST00000413725	DNAJC15	Q9Y5T4	150 aa		12.46	□□□□□ -0.41
SF1-206	ENST00000413725	DMXL2	Q8TDJ6	3036 aa		12.46	□□□□□ -0.42
SF1-206	ENST00000413725	ARHGAP10	A1A4S6	786 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	TMEM233	B4DJY2	109 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	PSMD12	O00232	456 aa	Predicted RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	RTCA	O00442	366 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	SCEL	O95171	688 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	B3GALT4	O96024	378 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	RNH1	P13489	461 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	LIF	P15018	202 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	IL10	P22301	178 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	HIST1H1T	P22492	207 aa	Predicted RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ATP5A1	P25705	553 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	CERS1	P27544	350 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	MAT1A	Q00266	395 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	HMGCS1	Q01581	520 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	SPIN4	Q56A73	249 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	BROX	Q5VW32	411 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	MRPL14	Q6P1L8	145 aa	Known RBP	12.45	□□□□□ -0.42
SF1-206	ENST00000413725	CYP20A1	Q6UW02	462 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	ATG14	Q6ZNE5	492 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	UBE3D	Q7Z6J8	389 aa		12.45	□□□□□ -0.42
SF1-206	ENST00000413725	VASH2	Q86V25	355 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms