RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SCYL1Q96KG9 808 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 QRFPRQ96P65 431 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 F2RL3Q96RI0 385 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 LMF1Q96S06 567 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 WDR77Q9BQA1 342 aaPredicted RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 REXO4Q9GZR2 422 aaKnown RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 ILKAPQ9H0C8 392 aaPredicted RBP13.94□□□□□ -0.18
LIMS4-201ENST00000413601 EPS8L2Q9H6S3 715 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 PRM3Q9NNZ6 103 aa13.94□□□□□ -0.18
LIMS4-201ENST00000413601 CNTRLQ7Z7A1 2325 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PRMT3O60678 531 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 UQCRHP07919 91 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 RBP1P09455 135 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 MYBL2P10244 700 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PCNAP12004 261 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 COL6A2P12110 1019 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 MAOAP21397 527 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 SOX11P35716 441 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 OR4D2P58180 307 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PCDH1Q08174 1060 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 MFAP5Q13361 173 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 GTF2H2Q13888 395 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 SLC29A2Q14542 456 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PCBP2Q15366 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
LIMS4-201ENST00000413601 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 CRB2Q5IJ48 1285 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 B3GNTL1Q67FW5 361 aaPredicted RBP13.93□□□□□ -0.18
LIMS4-201ENST00000413601 GTF2H2CQ6P1K8 395 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 MED27Q6P2C8 311 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 TRIM40Q6P9F5 258 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 ADGRD1Q6QNK2 874 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 Q6ZS92 163 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 CUZD1Q86UP6 607 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 LAS2Q8IYD9 372 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 EFCAB3Q8N7B9 438 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PPP4R1Q8TF05 950 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
LIMS4-201ENST00000413601 PTCHD1Q96NR3 888 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 EPB41L4BQ9H329 900 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 MAP10Q9P2G4 905 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 XPR1Q9UBH6 696 aa13.93□□□□□ -0.18
LIMS4-201ENST00000413601 E2F3O00716 465 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 B3GALT2O43825 422 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 SH3BGRLO75368 114 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 CERS1P27544 350 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 HPDP32754 393 aaPredicted RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 AP2B1P63010 937 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 TSNAXIP1Q2TAA8 658 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 LGSNQ5TDP6 509 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 PLAG1Q6DJT9 500 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 GRHL2Q6ISB3 625 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 ABHD17CQ6PCB6 329 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 PAPD4Q6PIY7 484 aaKnown RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 QSOX2Q6ZRP7 698 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 GOLGA7Q7Z5G4 137 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 MYLK4Q86YV6 388 aaPredicted RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 IQCKQ8N0W5 287 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 CYP4X1Q8N118 509 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 RNF175Q8N4F7 328 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 CISD2Q8N5K1 135 aaKnown RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 PTGR2Q8N8N7 351 aaPredicted RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 CATSPER1Q8NEC5 780 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 OR7G3Q8NG95 312 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 UBE2E3Q969T4 207 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 PHF21BQ96EK2 531 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 C19orf60Q96EN9 201 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 CNDP1Q96KN2 507 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 MAGEB10Q96LZ2 347 aaPredicted RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 SERINC2Q96SA4 455 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 LPAR4Q99677 370 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 NPLQ9BXD5 320 aaPredicted RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 MS4A8Q9BY19 250 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 IPPKQ9H8X2 491 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 PRDM7Q9NQW5 492 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 PLA2G3Q9NZ20 509 aa13.92□□□□□ -0.18
LIMS4-201ENST00000413601 TNPO3Q9Y5L0 923 aaKnown RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 SPENQ96T58 3664 aaKnown RBP13.92□□□□□ -0.18
LIMS4-201ENST00000413601 A0A088AWK7 358 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 A8MUI8 341 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 SMIM24O75264 130 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 F10P00742 488 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 TGFB1P01137 390 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 ZNF10P21506 573 aaPredicted RBP13.91□□□□□ -0.18
LIMS4-201ENST00000413601 EEF1DP29692 281 aaKnown RBP13.91□□□□□ -0.18
LIMS4-201ENST00000413601 MTTPP55157 894 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 TGM3Q08188 693 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 DDX39BQ13838 428 aaKnown RBP13.91□□□□□ -0.18
LIMS4-201ENST00000413601 EXT1Q16394 746 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 LIPJQ5W064 366 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 UBE3DQ7Z6J8 389 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 ATCAYQ86WG3 371 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 SNRNP40Q96DI7 357 aaKnown RBP13.91□□□□□ -0.18
LIMS4-201ENST00000413601 ACTR8Q9H981 624 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 COPS7BQ9H9Q2 264 aaPredicted RBP13.91□□□□□ -0.18
LIMS4-201ENST00000413601 NECTIN3Q9NQS3 549 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 PRDM9Q9NQV7 894 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
LIMS4-201ENST00000413601 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms