RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 MAGEB10Q96LZ2 347 aaPredicted RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 QRFPRQ96P65 431 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 MTERF1Q99551 399 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 MRPL57Q9BQC6 102 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 CCDC77Q9BR77 488 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 MRPL46Q9H2W6 279 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 OR51B5Q9H339 312 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 NOL11Q9H8H0 719 aaKnown RBP12.38□□□□□ -0.43
SSB-203ENST00000413002 ANAPC2Q9UJX6 822 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
SSB-203ENST00000413002 LOC102723996A0A087X1L8 192 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 A0A1B0GTL3 188 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 MYOCOSA0A1B0GUC4 107 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 CCDC189A1A4V9 331 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 A8MT66 165 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 J3QKU1 62 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 PPP6CO00743 305 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 SNPHO15079 494 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 PRR35P0CG20 571 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 MAOAP21397 527 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 HSD17B3P37058 310 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 CASRP41180 1078 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 ST13P50502 369 aaKnown RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 NEK2P51955 445 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 CDH13P55290 713 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 E2F2Q14209 437 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 ADPRMQ3LIE5 342 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 SFT2D3Q587I9 215 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 IRAK1BP1Q5VVH5 260 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 GRHL2Q6ISB3 625 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 CPEB2Q7Z5Q1 589 aaKnown RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 KBTBD2Q8IY47 623 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 LAS2Q8IYD9 372 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 SIRT6Q8N6T7 355 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 TMEM52Q8NDY8 209 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 BRIX1Q8TDN6 353 aaKnown RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 ATP6V1E2Q96A05 226 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 PTCHD1Q96NR3 888 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 OR1F2PQ96R84 312 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 MS4A8Q9BY19 250 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 PITHD1Q9GZP4 211 aaPredicted RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 LHPPQ9H008 270 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 ZNF700Q9H0M5 742 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 ZBTB26Q9HCK0 441 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 SEMA4BQ9NPR2 832 aaPredicted RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 PRDM7Q9NQW5 492 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 PTGFRNQ9P2B2 879 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 PCTPQ9UKL6 214 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 TNPO3Q9Y5L0 923 aaKnown RBP12.37□□□□□ -0.43
SSB-203ENST00000413002 TENM4Q6N022 2769 aa12.37□□□□□ -0.43
SSB-203ENST00000413002 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 A8MUA0 341 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 B3GALT2O43825 422 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 DPM1O60762 260 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 ZIC2O95409 532 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 F10P00742 488 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 ALPPP05187 535 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 ITGAMP11215 1152 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 RNH1P13489 461 aaKnown RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 GSTM2P28161 218 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 RPS13P62277 151 aaKnown RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 SKP1P63208 163 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 ACTN3Q08043 901 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 ZRSR2Q15696 482 aaKnown RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 PLEKHN1Q494U1 663 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 PRR30Q53SZ7 412 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 AGAP7PQ5VUJ5 663 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 B3GNTL1Q67FW5 361 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 SLC6A19Q695T7 634 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 JMJD6Q6NYC1 403 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 TRIM40Q6P9F5 258 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 ZNF793Q6ZN11 406 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 HUS1BQ8NHY5 278 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 PSMF1Q92530 271 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 UBE2E3Q969T4 207 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 IMMP1LQ96LU5 166 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 AGAP4Q96P64 663 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 CSF3RQ99062 836 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 WDR77Q9BQA1 342 aaPredicted RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 C12orf65Q9H3J6 166 aaKnown RBP12.36□□□□□ -0.43
SSB-203ENST00000413002 NECTIN3Q9NQS3 549 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 FETUBQ9UGM5 382 aa12.36□□□□□ -0.43
SSB-203ENST00000413002 A0A1W2PQ72 361 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 TTLL8A6PVC2 850 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 A8MUI8 341 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 MAGEB17A8MXT2 336 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 STX16-NPEPL1H3BU86 382 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 STX16O14662 325 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 DLX3O60479 287 aa12.35□□□□□ -0.43
SSB-203ENST00000413002 PRMT3O60678 531 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms