RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 MMP28Q9H239 520 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FZD8Q9H461 694 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ACTL8Q9H568 366 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RPF1Q9H9Y2 349 aaKnown RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 INTS10Q9NVR2 710 aaKnown RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OSER1Q9NX31 292 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRPC4Q9UBN4 977 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IL36AQ9UHA7 158 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FBXL5Q9UKA1 691 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CHKBQ9Y259 395 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MTCH2Q9Y6C9 303 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZDBF2Q9HCK1 2354 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 VPS13AQ96RL7 3174 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TEX13DA0A0J9YY54 714 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 A0A0U1RQK1 487 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 A0A1B0GUV1 79 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF320A2RRD8 509 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NPIPA3F8WFD2 350 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 H0YAE9 185 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FLRT2O43155 660 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SCO2O43819 266 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GLRA3O75311 464 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRDM1O75626 825 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GRAP2O75791 330 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ACSL3O95573 720 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EML2O95834 649 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PNPP00491 289 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 STAG3L1P0CL83 205 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ACP2P11117 423 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MSH3P20585 1137 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ALDH4A1P30038 563 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCND3P30281 292 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FRKP42685 505 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BTDP43251 543 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAGEA11P43364 429 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NT5C2P49902 561 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MTCP1P56278 107 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 POLR2LP62875 67 aaKnown RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TUBB4BP68371 445 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UBXN1Q04323 297 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OPCMLQ14982 345 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLMAPQ14BN4 828 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ACKR1Q16570 336 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TAZQ16635 292 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PTGISQ16647 500 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MEP1BQ16820 701 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF718Q3SXZ3 478 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UGT3A2Q3SY77 523 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KBTBD12Q3ZCT8 623 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GTDC1Q4AE62 458 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TECRLQ5HYJ1 363 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BEND3Q5T5X7 828 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARHGEF16Q5VV41 709 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LYSMD4Q5XG99 296 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CEACAM20Q6UY09 585 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RAD9BQ6WBX8 426 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DGLUCYQ7Z3D6 616 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GPR141Q7Z602 305 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RBM23Q86U06 439 aaKnown RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCDC60Q8IWA6 550 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DCUN1D3Q8IWE4 304 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UBALD2Q8IYN6 164 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RAB42Q8N4Z0 105 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NHLRC2Q8NBF2 726 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SPC24Q8NBT2 197 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR5T2Q8NGG2 359 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR10V1Q8NGI7 309 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR13J1Q8NGT2 312 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HEXDCQ8WVB3 486 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RSPH1Q8WYR4 309 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DYRK2Q92630 601 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MR1Q95460 341 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCDC47Q96A33 483 aaKnown RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BSCL2Q96G97 398 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 INPP4AQ96PE3 977 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BTBD9Q96Q07 612 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TGS1Q96RS0 853 aaKnown RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAP3K3Q99759 626 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NKX3-1Q99801 234 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C17orf62Q9BQA9 187 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KATNB1Q9BVA0 655 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FUT8Q9BYC5 575 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LSG1Q9H089 658 aaKnown RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UBE2ZQ9H832 354 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 AKIRIN1Q9H9L7 192 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MYNNQ9NPC7 610 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MRGBPQ9NV56 204 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLCO1C1Q9NYB5 712 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LRWD1Q9UFC0 647 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KCNG2Q9UJ96 466 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GMEB2Q9UKD1 530 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C2CD2Q9Y426 696 aa2.37□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LAMB2P55268 1798 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SCN9AQ15858 1988 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGHV4-61A0A0C4DH41 118 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SMIM1B2RUZ4 78 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 F8VVB4 439 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 F8VWA3 439 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BLOC1S5-TXNDC5H3BN57 136 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BMPR1BO00238 502 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms