RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 RNF11Q9Y3C5 154 aa13.22□□□□□ -0.29
GYPC-203ENST00000409836 TLDC2A0PJX2 215 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 SYNDIG1LA6NDD5 238 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 FHP07954 510 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 MYL2P10916 166 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 JAK1P23458 1154 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 MTTPP55157 894 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 PKNOX1P55347 436 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 PHEXP78562 749 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 RHAGQ02094 409 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 COL9A2Q14055 689 aaPredicted RBP13.21□□□□□ -0.29
GYPC-203ENST00000409836 ZRSR2Q15696 482 aaKnown RBP13.21□□□□□ -0.29
GYPC-203ENST00000409836 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 SOWAHCQ53LP3 525 aaPredicted RBP13.21□□□□□ -0.29
GYPC-203ENST00000409836 DCAF10Q5QP82 559 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 CPZQ66K79 652 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 QSOX2Q6ZRP7 698 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 OR4F6Q8NGB9 312 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 TBC1D20Q96BZ9 403 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 FER1L6-AS2Q96M78 137 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 ZIM3Q96PE6 472 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 SERINC2Q96SA4 455 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 TBCDQ9BTW9 1192 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.29
GYPC-203ENST00000409836 BRF2Q9HAW0 419 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 LYRM4Q9HD34 91 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 RRAGDQ9NQL2 400 aaPredicted RBP13.21□□□□□ -0.29
GYPC-203ENST00000409836 PRDM7Q9NQW5 492 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 HCN3Q9P1Z3 774 aa13.21□□□□□ -0.29
GYPC-203ENST00000409836 ZNF860A6NHJ4 632 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 MAGEB17A8MXT2 336 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 CHST10O43529 356 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ESRRBO95718 433 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 HPP00738 406 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 SERPIND1P05546 499 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
GYPC-203ENST00000409836 COX6A1P12074 109 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
GYPC-203ENST00000409836 HSD3B1P14060 373 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ACPPP15309 386 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 HSD3B2P26439 372 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 OTX2P32243 289 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ETV4P43268 484 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 RAB8AP61006 207 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 KCNAB2Q13303 367 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 CPSF6Q16630 551 aaKnown RBP eCLIP13.2□□□□□ -0.3
GYPC-203ENST00000409836 LIPMQ5VYY2 423 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ZNF793Q6ZN11 406 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 RNF165Q6ZSG1 346 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 GPRIN3Q6ZVF9 776 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 CHSY3Q70JA7 882 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 CA13Q8N1Q1 262 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ZCCHC7Q8N3Z6 543 aaKnown RBP13.2□□□□□ -0.3
GYPC-203ENST00000409836 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 OR5T3Q8NGG3 340 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 AGAP11Q8TF27 550 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 CDK15Q96Q40 435 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 TRMOQ9BU70 441 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 TRIM55Q9BYV6 548 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 ING2Q9H160 280 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
GYPC-203ENST00000409836 FBXL4Q9UKA2 621 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 DAPP1Q9UN19 280 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 PCDHGB7Q9Y5F8 929 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
GYPC-203ENST00000409836 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 SERTM1A2A2V5 107 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 BLACEA4D250 179 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 PEX12O00623 359 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 PPP6CO00743 305 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 PLPP1O14494 284 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 FFAR3O14843 346 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 GPR42O15529 346 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 B3GALT2O43825 422 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 ALOX12BO75342 701 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 SUPT7LO94864 414 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 B3GALT4O96024 378 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 CPA3P15088 417 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 HIST1H1TP22492 207 aaPredicted RBP13.19□□□□□ -0.3
GYPC-203ENST00000409836 ATP5A1P25705 553 aaKnown RBP13.19□□□□□ -0.3
GYPC-203ENST00000409836 PTX3P26022 381 aaPredicted RBP13.19□□□□□ -0.3
GYPC-203ENST00000409836 EMP2P54851 167 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 CDH13P55290 713 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 RAB38P57729 211 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
GYPC-203ENST00000409836 RBBP7Q16576 425 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 TCTN3Q6NUS6 607 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
GYPC-203ENST00000409836 MILR1Q7Z6M3 343 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 HPS6Q86YV9 775 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 SHISA5Q8N114 240 aa13.19□□□□□ -0.3
GYPC-203ENST00000409836 OR6Y1Q8NGX8 325 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms