RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TMEM35AQ53FP2 167 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 KHDRBS2Q5VWX1 349 aaKnown RBP21.12■□□□□ 0.97
PTCD3-203ENST00000409783 FRG2Q64ET8 278 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 C10orf107Q8IVU9 208 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 CA13Q8N1Q1 262 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 CCDC63Q8NA47 563 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 PEX11GQ96HA9 241 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 IP6K3Q96PC2 410 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 FRG2BQ96QU4 278 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 IQCGQ9H095 443 aaKnown RBP21.12■□□□□ 0.97
PTCD3-203ENST00000409783 SSU72Q9NP77 194 aaKnown RBP21.12■□□□□ 0.97
PTCD3-203ENST00000409783 TRPS1Q9UHF7 1281 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 MID2Q9UJV3 735 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 FAM208BQ5VWN6 2430 aa21.12■□□□□ 0.97
PTCD3-203ENST00000409783 FOXE1O00358 373 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 UBFD1O14562 309 aaKnown RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 ETHE1O95571 254 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 IGHEP01854 428 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 H2AFXP16104 143 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 ETV4P43268 484 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 EMP2P54851 167 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 LCP2Q13094 533 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 LIPMQ5VYY2 423 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 CPZQ66K79 652 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 TRIM40Q6P9F5 258 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 KIRREL2Q6UWL6 708 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 ZNF793Q6ZN11 406 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 FRMD7Q6ZUT3 714 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 CHSY3Q70JA7 882 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 MED25Q71SY5 747 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 APLFQ8IW19 511 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 CCNYL1Q8N7R7 359 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 APOBEC4Q8WW27 367 aaKnown RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 WBP1Q96G27 269 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 FAR2Q96K12 515 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 MAGEB10Q96LZ2 347 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 OR1F2PQ96R84 312 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 UBL7Q96S82 380 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-203ENST00000409783 TRIM55Q9BYV6 548 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 VN1R1Q9GZP7 353 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 P4HTMQ9NXG6 502 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 ACTL7BQ9Y614 415 aa21.11■□□□□ 0.97
PTCD3-203ENST00000409783 OR2W5A6NFC9 320 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 RTCAO00442 366 aaKnown RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 SCELO95171 688 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 MLYCDO95822 493 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 IL10P22301 178 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 ALDH3A1P30838 453 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 CCR10P46092 362 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 NAA20P61599 178 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 GPRIN3Q6ZVF9 776 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 EXD3Q8N9H8 876 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 SRFBP1Q8NEF9 429 aaKnown RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 AGAP11Q8TF27 550 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 TBC1D20Q96BZ9 403 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 MTFMTQ96DP5 389 aaKnown RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 BBC3Q96PG8 261 aaPredicted RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 KCNC2Q96PR1 638 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 TBCDQ9BTW9 1192 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 GATA5Q9BWX5 397 aaPredicted RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 NPLQ9BXD5 320 aaPredicted RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 ZNF717Q9BY31 904 aaPredicted RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 CENPHQ9H3R5 247 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 FARSBQ9NSD9 589 aaKnown RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 RALYQ9UKM9 306 aaKnown RBP21.1■□□□□ 0.97
PTCD3-203ENST00000409783 MKL2Q9ULH7 1088 aa21.1■□□□□ 0.97
PTCD3-203ENST00000409783 A0A1W2PQ72 361 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 ARGFXA6NJG6 315 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 AGPSO00116 658 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 SAP18O00422 153 aaKnown RBP21.09■□□□□ 0.97
PTCD3-203ENST00000409783 FHP07954 510 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 ATP5A1P25705 553 aaKnown RBP21.09■□□□□ 0.97
PTCD3-203ENST00000409783 PTX3P26022 381 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-203ENST00000409783 CERS1P27544 350 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 MTTPP55157 894 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 PKNOX1P55347 436 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 RHAGQ02094 409 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 TGM3Q08188 693 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 CHAF1BQ13112 559 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 CUL3Q13618 768 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 C10orf62Q5T681 223 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-203ENST00000409783 TMEM205Q6UW68 189 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 CDYL2Q8N8U2 506 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 SERINC2Q96SA4 455 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 MECRQ9BV79 373 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 RBCK1Q9BYM8 510 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 STK38LQ9Y2H1 464 aa21.09■□□□□ 0.97
PTCD3-203ENST00000409783 MASP2O00187 686 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 PLPP1O14494 284 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 ATXN7O15265 892 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-203ENST00000409783 TRIM13O60858 407 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 DNAJB5O75953 348 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 ESRRBO95718 433 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 HEXBP07686 556 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 CYC1P08574 325 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 RNH1P13489 461 aaKnown RBP21.08■□□□□ 0.97
PTCD3-203ENST00000409783 ATRXP46100 2492 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 ARFIP1P53367 373 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 POLE2P56282 527 aa21.08■□□□□ 0.97
PTCD3-203ENST00000409783 PHEXP78562 749 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms