RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 BTG2P78543 158 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 NAA30Q147X3 362 aaPredicted RBP13.81□□□□□ -0.2
CBX3-203ENST00000409747 CAPN12Q6ZSI9 719 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 GALNTL5Q7Z4T8 443 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 KIF2BQ8N4N8 673 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 ITLN2Q8WWU7 325 aaPredicted RBP13.81□□□□□ -0.2
CBX3-203ENST00000409747 CCT6BQ92526 530 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 TMEM125Q96AQ2 219 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 CPNE1Q99829 537 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 HES7Q9BYE0 225 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 NT5DC2Q9H857 520 aa13.81□□□□□ -0.2
CBX3-203ENST00000409747 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
CBX3-203ENST00000409747 LRBAP50851 2863 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 CTAGE15A4D2H0 777 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 ANKDD1BA6NHY2 528 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 NCF1BA6NI72 391 aaPredicted RBP13.8□□□□□ -0.2
CBX3-203ENST00000409747 NCF1CA8MVU1 366 aaPredicted RBP13.8□□□□□ -0.2
CBX3-203ENST00000409747 CLDN4O14493 209 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 CLGNO14967 610 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 ERI3O43414 337 aaKnown RBP13.8□□□□□ -0.2
CBX3-203ENST00000409747 NME2P1O60361 137 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 CLEC3AO75596 197 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 NCF1P14598 390 aaPredicted RBP13.8□□□□□ -0.2
CBX3-203ENST00000409747 STMN1P16949 149 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 NME2P22392 152 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 TRHRP34981 398 aaPredicted RBP13.8□□□□□ -0.2
CBX3-203ENST00000409747 MLF1P58340 268 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 MRGPRGQ86SM5 289 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 CTAGE6Q86UF2 777 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 GPSM1Q86YR5 675 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 ERP44Q9BS26 406 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 DEFB126Q9BYW3 111 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 TRIM45Q9H8W5 580 aaPredicted RBP13.8□□□□□ -0.2
CBX3-203ENST00000409747 SAYSD1Q9NPB0 183 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 NECTIN3Q9NQS3 549 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 DNAJC11Q9NVH1 559 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 SH3BGRL2Q9UJC5 107 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 CACNA1DQ01668 2161 aa13.8□□□□□ -0.2
CBX3-203ENST00000409747 ARHGAP10A1A4S6 786 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 LRIT2A6NDA9 550 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 C4orf51C9J302 202 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 B3GALT2O43825 422 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 WISP3O95389 354 aaPredicted RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 GSTA2P09210 222 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 CCDC166P0CW27 439 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 ESRRAP11474 423 aaPredicted RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 GGT5P36269 586 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 GP5P40197 560 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 GDF5P43026 501 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 HLCSP50747 726 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 CLCN2P51788 898 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 HSD17B7P56937 341 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 SRSF11Q05519 484 aaKnown RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 TGM3Q08188 693 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 RCN2Q14257 317 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 MAPKAPK3Q16644 382 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 SP5Q6BEB4 398 aaPredicted RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 TRIM40Q6P9F5 258 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 BNC2Q6ZN30 1099 aaPredicted RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 CYS1Q717R9 158 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 ARMC10Q8N2F6 343 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 POGLUT1Q8NBL1 392 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 NFAM1Q8NET5 270 aaPredicted RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 B3GNT7Q8NFL0 401 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 MS4A6EQ96DS6 147 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 GPR22Q99680 433 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 RBBP8Q99708 897 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 PHACTR1Q9C0D0 580 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 REXO4Q9GZR2 422 aaKnown RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 COPS7BQ9H9Q2 264 aaPredicted RBP13.79□□□□□ -0.2
CBX3-203ENST00000409747 CHST11Q9NPF2 352 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
CBX3-203ENST00000409747 NPIPA5E9PKD4 350 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 STK16O75716 305 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 MYO1DO94832 1006 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 S100BP04271 92 aaPredicted RBP13.78□□□□□ -0.2
CBX3-203ENST00000409747 ZNF24P17028 368 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 SSTR1P30872 391 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 HNRNPH1P31943 449 aaKnown RBP13.78□□□□□ -0.2
CBX3-203ENST00000409747 SMSP52788 366 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 RAB38P57729 211 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 PDK4Q16654 411 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 PAGE2BQ5JRK9 111 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 XKRXQ6PP77 449 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 Q6ZPB1 254 aaPredicted RBP13.78□□□□□ -0.2
CBX3-203ENST00000409747 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
CBX3-203ENST00000409747 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 SCUBE1Q8IWY4 988 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 ZNF595Q8IYB9 648 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 GHDCQ8N2G8 530 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 PTCD3Q96EY7 689 aaKnown RBP13.78□□□□□ -0.2
CBX3-203ENST00000409747 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 TMEM79Q9BSE2 394 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 EFCAB11Q9BUY7 163 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 AICDAQ9GZX7 198 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 DPH5Q9H2P9 285 aa13.78□□□□□ -0.2
CBX3-203ENST00000409747 CAB39LQ9H9S4 337 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms