RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TIGD6Q17RP2 521 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 DNAJA4Q8WW22 397 aaPredicted RBP24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 PLCL2Q9UPR0 1127 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 RNF13O43567 381 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 IFI30P13284 250 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 PGAM2P15259 253 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 PROZP22891 400 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 RNF111Q6ZNA4 994 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 DPH7Q9BTV6 452 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 PCDHGB2Q9Y5G2 931 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 THEGLP0DJG4 465 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 FAM86B1Q8N7N1 296 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 OR4K1Q8NGD4 311 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 HTRA1Q92743 480 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 BHMG1C9JSJ3 638 aaPredicted RBP24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 WDR5P61964 334 aaKnown RBP24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 SLC36A4Q6YBV0 504 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 OR4C15Q8NGM1 316 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 SHISA4Q96DD7 197 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 HSD3B1P14060 373 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 HSD3B2P26439 372 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 FAM189A2Q15884 450 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 RBM48Q5RL73 367 aaKnown RBP24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 AKAP14Q86UN6 197 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 NELL2Q99435 816 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 AZGP1P25311 298 aaKnown RBP24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 ACSL1P33121 698 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 GABRA3P34903 492 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 ATP4BP51164 291 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 PLCXD2Q0VAA5 305 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 SLAMF1Q13291 335 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 SPATS1Q496A3 300 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 DEFB134Q4QY38 66 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 TPRG1LQ5T0D9 272 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 ZDHHC1Q8WTX9 485 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 ASB6Q9NWX5 421 aa24.15■■□□□ 1.46
SPIRE1-202ENST00000409402 CCNOP22674 350 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 CLRN1P58418 232 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 TRAM2Q15035 370 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 ARMC10Q8N2F6 343 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 RHEBL1Q8TAI7 183 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 ZFP3Q96NJ6 502 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 CYTH4Q9UIA0 394 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 MEIS3P2A8K0S8 358 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 FARS2O95363 451 aaKnown RBP24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 ECHS1P30084 290 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 GDE1Q9NZC3 331 aa24.14■■□□□ 1.46
SPIRE1-202ENST00000409402 FPR1P21462 350 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 CYBRD1Q53TN4 286 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 USP53Q70EK8 1073 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 IGDCC3Q8IVU1 814 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 PACRGLQ8N7B6 248 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 LRRC15Q8TF66 581 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 MED28Q9H204 178 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 ACTR3BQ9P1U1 418 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 WASF2Q9Y6W5 498 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 C1orf226A1L170 272 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 EIF1AYO14602 144 aaKnown RBP24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 GLDCP23378 1020 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 CAPZA1P52907 286 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 ZNF101Q8IZC7 436 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 FCRL3Q96P31 734 aaPredicted RBP24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 MCHR1Q99705 422 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 TSSK6Q9BXA6 273 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 TRIM36Q9NQ86 728 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 OAZ3Q9UMX2 235 aa24.14■■□□□ 1.45
SPIRE1-202ENST00000409402 MBLAC1A4D2B0 266 aaPredicted RBP24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 HCRTR2O43614 444 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 CBFA2T3O75081 653 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 TMEM17Q86X19 198 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 EBF2Q9HAK2 575 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 PCDHB14Q9Y5E9 798 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 ZNF432O94892 652 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 PDYNP01213 254 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 PLP2Q04941 152 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 C15orf39Q6ZRI6 1047 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 LMAN1LQ9HAT1 526 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 AMBNQ9NP70 447 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 PPP4R1LQ9P1A2 415 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 MGAT4AQ9UM21 535 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 RAB28P51157 221 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 CATSPEREQ5SY80 951 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 TMEM225Q6GV28 225 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 ZC3H14Q6PJT7 736 aaKnown RBP24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 OR9I1Q8NGQ6 314 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 RAB8BQ92930 207 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 FABP12A6NFH5 140 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 TEX46H3BTG2 121 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 CH25HO95992 272 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 IL3P08700 152 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 SPINT3P49223 89 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 HHEXQ03014 270 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 RABEPKQ7Z6M1 372 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 TMCO6Q96DC7 493 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 KCTD7Q96MP8 289 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 DFNA5O60443 496 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 LILRB3O75022 631 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 S1PR4O95977 384 aa24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 XRCC1P18887 633 aaPredicted RBP24.13■■□□□ 1.45
SPIRE1-202ENST00000409402 HK1P19367 917 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms