RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 GALR3O60755 368 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 SMIM10L1P0DMW3 83 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 HSD3B1P14060 373 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 DRD4P21917 467 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ATP5A1P25705 553 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 HSD3B2P26439 372 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RBMS1P29558 406 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 BSGP35613 385 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 IDH3AP50213 366 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 CUL3Q13618 768 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RUNX2Q13950 521 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ERV3-1Q14264 604 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ATP6AP1LQ52LC2 224 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 TIPARPQ7Z3E1 657 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 PRSS58Q8IYP2 241 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 MMP21Q8N119 569 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 CACTIN-AS1Q8N1I8 211 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 METTL4Q8N3J2 472 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 CLHC1Q8NHS4 586 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 BCAS4Q8TDM0 211 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 CHTF18Q8WVB6 975 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 UCN3Q969E3 161 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 COL26A1Q96A83 441 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 SMIM10Q96HG1 83 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 QRFPRQ96P65 431 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ELAC2Q9BQ52 826 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 CENPKQ9BS16 269 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 DDA1Q9BW61 102 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 TRIM55Q9BYV6 548 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 C1orf109Q9NX04 203 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 VTI1BQ9UEU0 232 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 WASF3Q9UPY6 502 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 DLGAP4Q9Y2H0 992 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 TRPC5OSA6NMA1 111 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 E9PBE3 544 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SLCO1B7G3V0H7 640 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 DSCR3O14972 297 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 KLHL41O60662 606 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 CPNE3O75131 537 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 RSL1D1O76021 490 aaKnown RBP13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 TPP2P29144 1249 aaPredicted RBP13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 ARSFP54793 590 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SLAMF1Q13291 335 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 HERC3Q15034 1050 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 TMEM35AQ53FP2 167 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 TMEM164Q5U3C3 297 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 RHBDD2Q6NTF9 364 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SHISA6Q6ZSJ9 500 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 PIGWQ7Z7B1 504 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 ACOT4Q8N9L9 421 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 FNDC5Q8NAU1 212 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 NUDT8Q8WV74 236 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 GBP5Q96PP8 586 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 TMEM120AQ9BXJ8 343 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 ASCL3Q9NQ33 180 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SLC22A11Q9NSA0 550 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 RIC8BQ9NVN3 520 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 BAIAP2L1Q9UHR4 511 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SRPK3Q9UPE1 567 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 PCDHB3Q9Y5E6 796 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 PCDHGA8Q9Y5G5 932 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 SLC22A7Q9Y694 548 aa13.36□□□□□ -0.27
CHRNA1-204ENST00000409323 GNG14A0A1W2PPG7 69 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 SERTM1A2A2V5 107 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 FAM227AF5H4B4 570 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 PCDH7O60245 1069 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 JRKO75564 520 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 TROVE2P10155 538 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 HIST1H1TP22492 207 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 TACR1P25103 407 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 RORAP35398 523 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 MTTPP55157 894 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 NME5P56597 212 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 SHC2P98077 582 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 KIAA0040Q15053 153 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 LSM12Q3MHD2 195 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 C6orf136Q5SQH8 315 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 MANEAQ5SRI9 462 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 CCNYL2Q5T2Q4 361 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 C10orf62Q5T681 223 aaPredicted RBP13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 ARHGAP40Q5TG30 622 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 GARNL3Q5VVW2 1013 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 CYB5D1Q6P9G0 228 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 BPHLQ86WA6 291 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms