RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 KIFC1Q9BW19 673 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 ZFATQ9P243 1243 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 PAK5Q9P286 719 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF223Q9UK11 482 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-203ENST00000409225 YARS2Q9Y2Z4 477 aaKnown RBP15.5■□□□□ 0.07
CHMP3-203ENST00000409225 PSMD12O00232 456 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 SYT5O00445 386 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 OR1F1O43749 312 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 PRKNO60260 465 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 WDR1O75083 606 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 GLSO94925 669 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 OR6B1O95007 311 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 IGHG3P01860 377 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 ENO3P13929 434 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 HOXC12P31275 282 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 PEX19P40855 299 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 NAE1Q13564 534 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 SNX1Q13596 522 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 CILP2Q8IUL8 1156 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 TMEM251Q8N6I4 163 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 C1orf54Q8WWF1 131 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 ASB15Q8WXK1 588 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 NANOS1Q8WY41 292 aaKnown RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 CCDC77Q9BR77 488 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 CNPPD1Q9BV87 410 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 SARGQ9BW04 601 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF395Q9H8N7 513 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 PNO1Q9NRX1 252 aaKnown RBP15.49■□□□□ 0.07
CHMP3-203ENST00000409225 B4GALT7Q9UBV7 327 aa15.49■□□□□ 0.07
CHMP3-203ENST00000409225 A0A1B0GVC2 190 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 ATP6AP2A0A1C7CYW4 349 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 AQP7O14520 342 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 ATP6AP2O75787 350 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 OR2J2O76002 312 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 FTCDO95954 541 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 CELA3AP09093 270 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 RNH1P13489 461 aaKnown RBP15.48■□□□□ 0.07
CHMP3-203ENST00000409225 RPL22P35268 128 aaKnown RBP15.48■□□□□ 0.07
CHMP3-203ENST00000409225 HNF4AP41235 474 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 MAN2A2P49641 1150 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 RGS1Q08116 209 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 PWP1Q13610 501 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 XKR6Q5GH73 641 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 WLSQ5T9L3 541 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 RIPPLY2Q5TAB7 128 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 NDUFAF5Q5TEU4 345 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 AGTRAPQ6RW13 159 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 LCTLQ6UWM7 567 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 GK5Q6ZS86 529 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 ABHD13Q7L211 337 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 GPALPP1Q8IXQ4 340 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 CPNE9Q8IYJ1 553 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 FAM109AQ8N4B1 249 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 LRRN4CLQ8ND94 238 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 VMP1Q96GC9 406 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 PDLIM2Q96JY6 352 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 LDAHQ9H6V9 325 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 NEUROD4Q9HD90 331 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 EIF2B3Q9NR50 452 aaKnown RBP15.48■□□□□ 0.07
CHMP3-203ENST00000409225 KLHL42Q9P2K6 505 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 VPS9D1Q9Y2B5 631 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 MED16Q9Y2X0 877 aa15.48■□□□□ 0.07
CHMP3-203ENST00000409225 CTAGE9A4FU28 777 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 BTNL10A8MVZ5 291 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 MIF4GDA9UHW6 222 aaKnown RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 FAM47E-STBD1D6RA91 191 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 LY6G6DO95868 133 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 TACR1P25103 407 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 PCSK6P29122 969 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 SOX3P41225 446 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 CCR8P51685 355 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 RAB8AP61006 207 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 BASP1P80723 227 aaKnown RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF750Q32MQ0 723 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 HECTD2Q5U5R9 776 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 KIAA0930Q6ICG6 404 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 NIPAL1Q6NVV3 410 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 NEPROQ6NW34 567 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 CSPG4Q6UVK1 2322 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 KRTAP1-3Q8IUG1 177 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 RELL2Q8NC24 303 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 UTP15Q8TED0 518 aaKnown RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 SARAFQ96BY9 339 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 GPR21Q99679 349 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 FAM173AQ9BQD7 235 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 CCDC68Q9H2F9 335 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 EXO5Q9H790 373 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 IL1RL2Q9HB29 575 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 FBXO6Q9NRD1 293 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 INTS10Q9NVR2 710 aaKnown RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 SAMD15Q9P1V8 674 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 ADAMTS6Q9UKP5 1117 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 SOX13Q9UN79 622 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 DHRS7Q9Y394 339 aa15.47■□□□□ 0.07
CHMP3-203ENST00000409225 EPN1Q9Y6I3 576 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-203ENST00000409225 ZFAND5O76080 213 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 NPPBP16860 134 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 BMP5P22003 454 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms