RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 G3V3Y1 287 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 CHST10O43529 356 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 PRKNO60260 465 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 LCMT2O60294 686 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 TJP3O95049 919 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 IPO7O95373 1038 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 SYF2O95926 243 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 SLC35G6P0C7Q6 338 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 EPXP11678 715 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 ENDOUP21128 410 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 BMP5P22003 454 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 HRH2P25021 359 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 FMO4P31512 558 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 TBPL1P62380 186 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 HERC3Q15034 1050 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 DEFB134Q4QY38 66 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 WLSQ5T9L3 541 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 NDUFAF5Q5TEU4 345 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 CAPN13Q6MZZ7 669 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 C16orf47Q6ZP98 133 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 SEM1Q6ZVN7 128 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 FAM109AQ8N4B1 249 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 FBXO15Q8NCQ5 510 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 NAXEQ8NCW5 288 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 PPHLN1Q8NEY8 458 aaKnown RBP11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 B3GNT7Q8NFL0 401 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 LPGAT1Q92604 370 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 NECTIN3Q9NQS3 549 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 CHRAC1Q9NRG0 131 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 TREX1Q9NSU2 369 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 HPF1Q9NWY4 346 aa11.93□□□□□ -0.5
CHRNA1-203ENST00000409219 TUBAL3A6NHL2 446 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 CLCA1A8K7I4 914 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 EFCAB8A8MWE9 144 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 SMAD7O15105 426 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 SUSD5O60279 629 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 OR6B1O95007 311 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 C8BP07358 591 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 ARNTP27540 789 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 MAN2A2P49641 1150 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 MEF2AQ02078 507 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 RPS6KA1Q15418 735 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 GK5Q6ZS86 529 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 SLC13A5Q86YT5 568 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 ALG3Q92685 438 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 SARAFQ96BY9 339 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 Q96MF0 132 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 SLC30A3Q99726 388 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 TSGA10Q9BZW7 698 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 CCDC177Q9NQR7 707 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 YARS2Q9Y2Z4 477 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 NCKAP5O14513 1909 aa11.92□□□□□ -0.5
CHRNA1-203ENST00000409219 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 CTAGE9A4FU28 777 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 HSPB2A8KAH6 182 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 DVL2O14641 736 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 NDUFS4O43181 175 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 ARHGEF9O43307 516 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 OR2J2O76002 312 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 MYO1DO94832 1006 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 HRGP04196 525 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 GABRA1P14867 456 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 ALOX12P18054 663 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 SKIV2L2P42285 1042 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 POU4F3Q15319 338 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 HSPB2Q16082 182 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 IL20RBQ6UXL0 311 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 GPALPP1Q8IXQ4 340 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 OTUD6BQ8N6M0 293 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 MNS1Q8NEH6 495 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 ARMC2Q8NEN0 867 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 LINC01560Q8TB33 94 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 SLC35B2Q8TB61 432 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 LRRC46Q96FV0 321 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 NAPGQ99747 312 aaPredicted RBP11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 AARSD1Q9BTE6 412 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 FAM129AQ9BZQ8 928 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 LIN28AQ9H9Z2 209 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 TRPS1Q9UHF7 1281 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 FOXD3Q9UJU5 478 aaPredicted RBP11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
CHRNA1-203ENST00000409219 ATP6AP2A0A1C7CYW4 349 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 H3BMM5 538 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 ATP6AP2O75787 350 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 GOSR1O95249 250 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 ESR1P03372 595 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 CHRM3P20309 590 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 SOX3P41225 446 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 RWDD2BP57060 319 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 CRADDP78560 199 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 FOXO1Q12778 655 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 SPA17Q15506 151 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms