RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CEACAM7Q14002 265 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 TRIP6Q15654 476 aaKnown RBP20.01■□□□□ 0.79
TPM1-208ENST00000404484 UGT8Q16880 541 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 C6orf10Q5SRN2 563 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 CPTPQ5TA50 214 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 ANXA8L1Q5VT79 327 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 KANSL1Q7Z3B3 1105 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 ASPGQ86U10 573 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 ARL10Q8N8L6 244 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 VPS37AQ8NEZ2 397 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.01■□□□□ 0.791e-6■□□□□ 10.4
TPM1-208ENST00000404484 BAHD1Q8TBE0 780 aaPredicted RBP20.01■□□□□ 0.79
TPM1-208ENST00000404484 JADE3Q92613 823 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 RSC1A1Q92681 617 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 STMN2Q93045 179 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 KCNC2Q96PR1 638 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 SLC39A3Q9BRY0 314 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 SUCOQ9UBS9 1254 aaKnown RBP20.01■□□□□ 0.79
TPM1-208ENST00000404484 RHPN2P1A8MT19 583 aa20■□□□□ 0.79
TPM1-208ENST00000404484 DNAJA2O60884 412 aa20■□□□□ 0.79
TPM1-208ENST00000404484 ATP6V1G2O95670 118 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TYRP1P17643 537 aa20■□□□□ 0.79
TPM1-208ENST00000404484 SLC6A2P23975 617 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TPP2P29144 1249 aaPredicted RBP20■□□□□ 0.79
TPM1-208ENST00000404484 HNRNPH1P31943 449 aaKnown RBP20■□□□□ 0.79
TPM1-208ENST00000404484 GRK6P43250 576 aa20■□□□□ 0.79
TPM1-208ENST00000404484 SSR2P43308 183 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TRA2BP62995 288 aaKnown RBP20■□□□□ 0.79
TPM1-208ENST00000404484 SIM1P81133 766 aaPredicted RBP20■□□□□ 0.79
TPM1-208ENST00000404484 CAPRIN1Q14444 709 aaKnown RBP20■□□□□ 0.79
TPM1-208ENST00000404484 OR4C11Q6IEV9 310 aa20■□□□□ 0.79
TPM1-208ENST00000404484 FAM71E1Q6IPT2 247 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TRIM40Q6P9F5 258 aa20■□□□□ 0.79
TPM1-208ENST00000404484 DLEU7Q6UYE1 221 aa20■□□□□ 0.79
TPM1-208ENST00000404484 OR2L5Q8NG80 312 aa20■□□□□ 0.79
TPM1-208ENST00000404484 NT5CQ8TCD5 201 aa20■□□□□ 0.79
TPM1-208ENST00000404484 WDR60Q8WVS4 1066 aa20■□□□□ 0.79
TPM1-208ENST00000404484 CGREF1Q99674 301 aa20■□□□□ 0.79
TPM1-208ENST00000404484 SH3GL1Q99961 368 aa20■□□□□ 0.79
TPM1-208ENST00000404484 ZFYVE21Q9BQ24 234 aa20■□□□□ 0.79
TPM1-208ENST00000404484 ZNF717Q9BY31 904 aaPredicted RBP20■□□□□ 0.79
TPM1-208ENST00000404484 SEMA6CQ9H3T2 930 aa20■□□□□ 0.79
TPM1-208ENST00000404484 EPB41L1Q9H4G0 881 aa20■□□□□ 0.79
TPM1-208ENST00000404484 DDX31Q9H8H2 851 aaKnown RBP20■□□□□ 0.79
TPM1-208ENST00000404484 A0A096LPI6 279 aa20■□□□□ 0.79
TPM1-208ENST00000404484 URADA6NGE7 173 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TRPC1P48995 793 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TAS2R50P59544 299 aa20■□□□□ 0.79
TPM1-208ENST00000404484 C2orf80Q0P641 193 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TOR1AIP1Q5JTV8 583 aa20■□□□□ 0.79
TPM1-208ENST00000404484 FCRL6Q6DN72 434 aa20■□□□□ 0.79
TPM1-208ENST00000404484 SLC25A45Q8N413 288 aa20■□□□□ 0.79
TPM1-208ENST00000404484 ZNF655Q8N720 491 aaPredicted RBP20■□□□□ 0.79
TPM1-208ENST00000404484 EFCAB3Q8N7B9 438 aa20■□□□□ 0.79
TPM1-208ENST00000404484 CAMKVQ8NCB2 501 aa20■□□□□ 0.79
TPM1-208ENST00000404484 OR7A2PQ8NGA2 310 aa20■□□□□ 0.79
TPM1-208ENST00000404484 OR8J3Q8NGG0 315 aa20■□□□□ 0.79
TPM1-208ENST00000404484 RERGQ96A58 199 aaPredicted RBP20■□□□□ 0.79
TPM1-208ENST00000404484 COQ8BQ96D53 544 aa20■□□□□ 0.79
TPM1-208ENST00000404484 MS4A6EQ96DS6 147 aa20■□□□□ 0.79
TPM1-208ENST00000404484 TBCDQ9BTW9 1192 aa20■□□□□ 0.79
TPM1-208ENST00000404484 DUSP26Q9BV47 211 aa20■□□□□ 0.79
TPM1-208ENST00000404484 BHLHE41Q9C0J9 482 aaPredicted RBP20■□□□□ 0.79
TPM1-208ENST00000404484 SLC6A16Q9GZN6 736 aa20■□□□□ 0.79
TPM1-208ENST00000404484 GOLGA4Q13439 2230 aaKnown RBP19.99■□□□□ 0.79
TPM1-208ENST00000404484 STAMBPO95630 424 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 GBAP04062 536 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 ADRB1P08588 477 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 EEFSECP57772 596 aaKnown RBP19.99■□□□□ 0.79
TPM1-208ENST00000404484 HEPACAMQ14CZ8 416 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 OR4F3Q6IEY1 312 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 FBXO42Q6P3S6 717 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 RNF44Q7L0R7 432 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 SLC15A3Q8IY34 581 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 NATD1Q8N6N6 113 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 DNAJB14Q8TBM8 379 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 NUDT8Q8WV74 236 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 GAL3ST3Q96A11 431 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 TMEM125Q96AQ2 219 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 PPCDCQ96CD2 204 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 ASB9Q96DX5 294 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 DUSP23Q9BVJ7 150 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 ABCG4Q9H172 646 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 CD300AQ9UGN4 299 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 PILRAQ9UKJ1 303 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 PCDHA9Q9Y5H5 950 aa19.99■□□□□ 0.79
TPM1-208ENST00000404484 NME4O00746 187 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 ERI3O43414 337 aaKnown RBP19.98■□□□□ 0.79
TPM1-208ENST00000404484 NUDT21O43809 227 aaKnown RBP19.98■□□□□ 0.79
TPM1-208ENST00000404484 GUCY1B2O75343 617 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 ENTPD5O75356 428 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 FURINP09958 794 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 ALPPL2P10696 532 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 HSD17B1P14061 328 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 HOXB3P14651 431 aaPredicted RBP19.98■□□□□ 0.79
TPM1-208ENST00000404484 CDH3P22223 829 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 FOXK2Q01167 660 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 KLC1Q07866 573 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 HYAL2Q12891 473 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 TRAP1Q12931 704 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms