RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 CYP4X1Q8N118 509 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 RNF175Q8N4F7 328 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 CISD2Q8N5K1 135 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 EFCAB3Q8N7B9 438 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 PTGR2Q8N8N7 351 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 PLPP5Q8NEB5 264 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 CATSPER1Q8NEC5 780 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 PHF21BQ96EK2 531 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 C19orf60Q96EN9 201 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 PTCHD1Q96NR3 888 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 WDR77Q9BQA1 342 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 TXLNGYQ9BZA5 131 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 EPS8L2Q9H6S3 715 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 A8MUI8 341 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 KLK8O60259 260 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 CYC1P08574 325 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 SNRPAP09012 282 aaKnown RBP17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 CERS1P27544 350 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 CASP2P42575 452 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 OR4D2P58180 307 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 MFAP5Q13361 173 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 SLC29A2Q14542 456 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 CRB2Q5IJ48 1285 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 MED27Q6P2C8 311 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 TRIM40Q6P9F5 258 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 PAPD4Q6PIY7 484 aaKnown RBP17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 IGFL2Q6UWQ7 119 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 Q6ZS92 163 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 GOLGA7Q7Z5G4 137 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 FAM47BQ8NA70 645 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 OR2L5Q8NG80 312 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 DNAJB14Q8TBM8 379 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 ZNF473Q8WTR7 871 aaKnown RBP17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 QRFPRQ96P65 431 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 EPB41L4BQ9H329 900 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 ACTR8Q9H981 624 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 MYO18BQ8IUG5 2567 aa17.08■□□□□ 0.32
PTPRN2-204ENST00000404321 CCDC189A1A4V9 331 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 SAP18O00422 153 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 B3GALT2O43825 422 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 PRMT3O60678 531 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 TGFB1P01137 390 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 RBP1P09455 135 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 EEF1DP29692 281 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 SOX11P35716 441 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 ARL1P40616 181 aaPredicted RBP17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 UQCRFS1P47985 274 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 GTF2H2Q13888 395 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 PCBP2Q15366 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 ADPRMQ3LIE5 342 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 FCRLBQ6BAA4 426 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 GRHL2Q6ISB3 625 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 GTF2H2CQ6P1K8 395 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 ABHD17CQ6PCB6 329 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 RIPOR1Q6ZS17 1223 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 ATCAYQ86WG3 371 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 IQCKQ8N0W5 287 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 OR7G3Q8NG95 312 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 SEC16BQ96JE7 1060 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 IPPKQ9H8X2 491 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 COPS7BQ9H9Q2 264 aaPredicted RBP17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 NECTIN3Q9NQS3 549 aa17.07■□□□□ 0.32
PTPRN2-204ENST00000404321 A0A088AWK7 358 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 A8MUA0 341 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 RTCAO00442 366 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 E2F3O00716 465 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 VPS4BO75351 444 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 ICAM2P13598 275 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 ZNF10P21506 573 aaPredicted RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 ST13P50502 369 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 HNRNPFP52597 415 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 ARG2P78540 354 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 ZNF33BQ06732 778 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 E2F2Q14209 437 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 TSNAXIP1Q2TAA8 658 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 LGSNQ5TDP6 509 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 PLAG1Q6DJT9 500 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 ADGRD1Q6QNK2 874 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 UBE3DQ7Z6J8 389 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 LAS2Q8IYD9 372 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 TMEM52Q8NDY8 209 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 UBE2E3Q969T4 207 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 SNRNP40Q96DI7 357 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 CDK15Q96Q40 435 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 LMF1Q96S06 567 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 LPAR4Q99677 370 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 MS4A8Q9BY19 250 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 OR51B5Q9H339 312 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 CLK4Q9HAZ1 481 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 VPS4AQ9UN37 437 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 TNPO3Q9Y5L0 923 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
PTPRN2-204ENST00000404321 GOLGA8RI6L899 631 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 COL6A2P12110 1019 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 GNLYP22749 145 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 HPDP32754 393 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 PIK3CGP48736 1102 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 MTTPP55157 894 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms