RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FAM219AQ8IW50 185 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 FBXO16Q8IX29 292 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 C4orf19Q8IY42 314 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 MAML2Q8IZL2 1156 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 BMPERQ8N8U9 685 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 CNNM3Q8NE01 707 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 SEPT1Q8WYJ6 367 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 ATP6V0A1Q93050 837 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 TMEM143Q96AN5 459 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 LRRC3BQ96PB8 259 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 FNBP1Q96RU3 617 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 KATNB1Q9BVA0 655 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLC2A11Q9BYW1 496 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 DNAJC4Q9NNZ3 241 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 SIP14410 1827 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 IGSF9BQ9UPX0 1349 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 GSTTP1A0A1W2PQM5 241 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 ANKRD61A6NGH8 418 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 DDX39AO00148 427 aaKnown RBP4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CHMP2AO43633 222 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 DUSP11O75319 330 aaKnown RBP4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 SMC2O95347 1197 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CAVIN2O95810 425 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 NGFP01138 241 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CSN3P07498 182 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 INHBAP08476 426 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 SUPT20HL2P0C7V6 817 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CYBAP13498 195 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 TCF4P15884 667 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLC12A3P55017 1021 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 ARHGAP1Q07960 439 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 TAF10Q12962 218 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CUL3Q13618 768 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCL14Q16627 93 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 XKR3Q5GH77 459 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLC35E4Q6ICL7 350 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CEACAM20Q6UY09 585 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 USP43Q70EL4 1123 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 OTUD6AQ7L8S5 288 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 ADCK2Q7Z695 626 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 MMD2Q8IY49 270 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 THNSL1Q8IYQ7 743 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 EID3Q8N140 333 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF611Q8N823 705 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 OR10V1Q8NGI7 309 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 PPTC7Q8NI37 304 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 VANGL1Q8TAA9 524 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CD99L2Q8TCZ2 262 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 AFAP1L1Q8TED9 768 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 RAD54LQ92698 747 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 PAGE5Q96GU1 130 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 NSL1Q96IY1 281 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 GSDMAQ96QA5 445 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 LXNQ9BS40 222 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 URM1Q9BTM9 101 aaKnown RBP4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 TIPINQ9BVW5 301 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 EDEM3Q9BZQ6 932 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRIM9Q9C026 710 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CDH20Q9HBT6 801 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 SIX2Q9NPC8 291 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 ADPRHL2Q9NX46 363 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF624Q9P2J8 865 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 WDR83OSQ9Y284 106 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CITO14578 2027 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 CENPFP49454 3210 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRIP11Q15643 1979 aa4.49□□□□□ -1.69
HMGB3P19-201ENST00000403971 PVALEFA0A1B0GWK0 134 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 PMS2P5A8MQ11 134 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 E9PMD0 336 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF197O14709 1029 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CLIC2O15247 247 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 PRKRAO75569 313 aaKnown RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 STBD1O95210 358 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CD48P09326 243 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 PLA2G4BP0C869 781 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC192P0DO97 292 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CAPN2P17655 700 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 EFNA1P20827 205 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 EEF1B2P24534 225 aaKnown RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CD27P26842 260 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 YWHABP31946 246 aaKnown RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CEACAM8P31997 349 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 TCF7P36402 384 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 PPP1R2P41236 205 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 PRKCIP41743 596 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 ODF4Q2M2E3 257 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 HSDL1Q3SXM5 330 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 DCLRE1AQ6PJP8 1040 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 DNAJB7Q7Z6W7 309 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC60Q8IWA6 550 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 LRRC15Q8TF66 581 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC47Q96A33 483 aaKnown RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 DNAJC19Q96DA6 116 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 SPATA33Q96N06 139 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 RAB3IPQ96QF0 476 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC3Q9BQI4 270 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 MGME1Q9BQP7 344 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms