RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 H3BMM5 538 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR2J2O76002 312 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FTCDO95954 541 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RAF1P04049 648 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TUBB4AP04350 444 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MPC1LP0DKB6 136 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SMIM10L1P0DMW3 83 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ALOX12P18054 663 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CD53P19397 219 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 STIP1P31948 543 aaKnown RBP11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 HERC3Q15034 1050 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SLC25A35Q3KQZ1 300 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FLYWCH1Q4VC44 716 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 UBE2R2Q712K3 238 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CAMKMTQ7Z624 323 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CILP2Q8IUL8 1156 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CNGA4Q8IV77 575 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DENND6AQ8IWF6 608 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CPNE9Q8IYJ1 553 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TMEM156Q8N614 296 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR4K1Q8NGD4 311 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CD200R1Q8TD46 325 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 UTP15Q8TED0 518 aaKnown RBP11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 NCLNQ969V3 563 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SMIM10Q96HG1 83 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PDLIM2Q96JY6 352 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR4K3Q96R72 315 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SARGQ9BW04 601 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SGPP1Q9BX95 441 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FBXW2Q9UKT8 454 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PDE10AQ9Y233 779 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DOCK7Q96N67 2140 aa11.02□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR14I1A6ND48 311 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BTNL10A8MVZ5 291 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NDUFS4O43181 175 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CBFA2T2O43439 604 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CEP104O60308 925 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MYO1DO94832 1006 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TPM3P06753 285 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HRH2P25021 359 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ADSLP30566 484 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 UQCRC1P31930 480 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SOX3P41225 446 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SSR4P51571 173 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CLCN2P51788 898 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RAB8AP61006 207 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PLGLB1Q02325 96 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NAE1Q13564 534 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SNX1Q13596 522 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DAZAP2Q15038 168 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SIX1Q15475 284 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MRNIPQ6NTE8 343 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 IL20RBQ6UXL0 311 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RAD9BQ6WBX8 426 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CXXC5Q7LFL8 322 aaKnown RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CXorf67Q86X51 503 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CA13Q8N1Q1 262 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZNF321PQ8N8H1 164 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ACRBPQ8NEB7 543 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 B3GNT7Q8NFL0 401 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ABHD11Q8NFV4 315 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 GOT1L1Q8NHS2 421 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 KIAA1191Q96A73 305 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TCF12Q99081 682 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 GPR21Q99679 349 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 IL22Q9GZX6 179 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RHBGQ9H310 441 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TIMMDC1Q9NPL8 285 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PRDM9Q9NQV7 894 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FBXO6Q9NRD1 293 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SOX13Q9UN79 622 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DRG1Q9Y295 367 aaKnown RBP11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DHRS7Q9Y394 339 aa11.02□□□□□ -0.65
SPTLC1P3-201ENST00000403408 USF3Q68DE3 2245 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 MYOCOSA0A1B0GUC4 107 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 FIGNL2A6NMB9 653 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 E5RI56 91 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AQP7O14520 342 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 BCKDKO14874 412 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 OR1F1O43749 312 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 ZBTB14O43829 449 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 AVILO75366 819 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 TPM1P09493 284 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RFPL3SP0C7P2 107 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 SLC35G6P0C7Q6 338 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 JAK1P23458 1154 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 PCSK6P29122 969 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CETN2P41208 172 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 HNF4AP41235 474 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NPY2RP49146 381 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 DNASE1L1P49184 302 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 NAP1L1P55209 391 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 CTBP1Q13363 440 aa11.01□□□□□ -0.65
SPTLC1P3-201ENST00000403408 RUNX2Q13950 521 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms