RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 ANKRD53Q8N9V6 530 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TTLQ8NG68 377 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR14C36Q8NHC7 312 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 SGTBQ96EQ0 304 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 SDSLQ96GA7 329 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 CEP170BQ9Y4F5 1589 aaPredicted RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 ZNF705GA8MUZ8 300 aaPredicted RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 CHRNB1P11230 501 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 RPS12P25398 132 aaKnown RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 PPP2CAP67775 309 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 PRAMEF13Q5VWM6 474 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 SNX29P2Q8IUI4 249 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 GTPBP8Q8N3Z3 284 aaPredicted RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR51D1Q8NGF3 324 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR4D6Q8NGJ1 314 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 PNPLA2Q96AD5 504 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TMEM125Q96AQ2 219 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 MYRFLQ96LU7 910 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 PCDHB18PQ96TA0 734 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 PAPOLGQ9BWT3 736 aaKnown RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 POPDC3Q9HBV1 291 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 MARCH2Q9P0N8 246 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 NR2E3Q9Y5X4 410 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TCHHQ07283 1943 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 A0A1W2PPL8 197 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR1F1O43749 312 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TLL1O43897 1013 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 SC5DO75845 299 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 RAB3AP20336 220 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 CDK2P24941 298 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 CDKN1CP49918 316 aaPredicted RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 CDK3Q00526 305 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 MED27Q6P2C8 311 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 NAT8LQ8N9F0 302 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR1J4Q8NGS1 313 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 CNOT9Q92600 299 aaKnown RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 APOLD1Q96LR9 279 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR2M4Q96R27 311 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 RPH3ALQ9UNE2 315 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 A0A0G2JLW4 131 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 UBBP0CG47 229 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 UBCP0CG48 685 aaKnown RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 ETFAP13804 333 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 RPS27AP62979 156 aaKnown RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 UBA52P62987 128 aaKnown RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 FLI1Q01543 452 aaPredicted RBP8.12□□□□□ -1.11
CHD8-201ENST00000399982 PTCHD3Q3KNS1 767 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 ATAT1Q5SQI0 421 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 C9orf131Q5VYM1 1079 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 OR52E8Q6IFG1 317 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 MINDY1Q8N5J2 469 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 MS4A15Q8N5U1 240 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 ZBTB2Q8N680 514 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 ESX1Q8N693 406 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TSSK3Q96PN8 268 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 CSPG4P5Q96PW8 444 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 ACOT13Q9NPJ3 140 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 TVP23BQ9NYZ1 205 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 A3GALT2U3KPV4 340 aa8.12□□□□□ -1.11
CHD8-201ENST00000399982 MYPNQ86TC9 1320 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 IQCF5A8MTL0 148 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 A8MU76 341 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 F8W036 122 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 RBBP9O75884 186 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 PIRTP0C851 137 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 RPL35P42766 123 aaKnown RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 WASP42768 502 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 MRPS5P82675 430 aaKnown RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 TMEM164Q5U3C3 297 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 SLC35B2Q8TB61 432 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 BIRC7Q96CA5 298 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 PIWIL1Q96J94 861 aaKnown RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 ADAM2Q99965 735 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 MRPL45Q9BRJ2 306 aaKnown RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 HERPUD2Q9BSE4 406 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 TBL1XR1Q9BZK7 514 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 DKKL1Q9UK85 242 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 PRSS44E7EML9 344 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 K7EPK0 472 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 WNT7AO00755 349 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 PRAMEF2O60811 474 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 APOA2P02652 100 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 CFIP05156 583 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 PRKXP51817 358 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 MRPL49Q13405 166 aaKnown RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 TMPPEQ6ZT21 453 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 SLC29A4Q7RTT9 530 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 FAM71E2Q8N5Q1 922 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 LGMNQ99538 433 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 SEMA3CQ99985 751 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 DPCDQ9BVM2 203 aaPredicted RBP8.11□□□□□ -1.11
CHD8-201ENST00000399982 ABCG5Q9H222 651 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 NPIPA7E9PJI5 369 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 BANF1O75531 89 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 NPIPA8P0DM63 369 aa8.11□□□□□ -1.11
CHD8-201ENST00000399982 HOXB9P17482 250 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms