RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PSKH1P11801 424 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 MTTPP55157 894 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 PRKCDQ05655 676 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TNFAIP8L3Q5GJ75 292 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 JAGN1Q8N5M9 183 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 BOLLQ8N9W6 283 aaKnown RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 NLGN4YQ8NFZ3 816 aaPredicted RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 SPPL3Q8TCT6 385 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 PTCHD1Q96NR3 888 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 EPYCQ99645 322 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 IRF2BPLQ9H1B7 796 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 C12orf4Q9NQ89 552 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 RPL36Q9Y3U8 105 aaKnown RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 NUMBLQ9Y6R0 609 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 CIB4A0PJX0 185 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 VEGFDO43915 354 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF16P17020 682 aaPredicted RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 HNRNPKP61978 463 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 RBM48Q5RL73 367 aaKnown RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 NAT8LQ8N9F0 302 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 RTP3Q9BQQ7 232 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 SMURF1Q9HCE7 757 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 HEBP1Q9NRV9 189 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 PADI2Q9Y2J8 665 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 A0A1W2PRQ8 180 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 EI24O14681 340 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF234Q14588 700 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZMYND11Q15326 602 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 C4orf46Q504U0 113 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 LRRC69Q6ZNQ3 347 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 Q6ZVL8 140 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 OR8H1Q8NGG4 311 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ABHD5Q8WTS1 349 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 LRRC58Q96CX6 371 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 CCDC120Q96HB5 630 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 RADILQ96JH8 1075 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 CNDP2Q96KP4 475 aaKnown RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 DMRTB1Q96MA1 342 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 C17orf62Q9BQA9 187 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF395Q9H8N7 513 aaPredicted RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 SH3BGRL2Q9UJC5 107 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 PLEKHA6Q9Y2H5 1048 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 PLD2O14939 933 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 SOCS5O75159 536 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 SEMA3DO95025 777 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 DIRAS1O95057 198 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 APOC1P02654 83 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 GSTT2BP0CG30 244 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ARL9Q6T311 187 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 FIP1L1Q6UN15 594 aaKnown RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 TTC9BQ8N6N2 239 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 NXPE3Q969Y0 559 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 CAMK1GQ96NX5 476 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 KCNA7Q96RP8 456 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZDHHC2Q9UIJ5 367 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 POMPQ9Y244 141 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ABLIM1O14639 778 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 PITPNAQ00169 270 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 DUOXA1Q1HG43 343 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 OR9A1PQ8NGU1 263 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 RHCGQ9UBD6 479 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 FETUBQ9UGM5 382 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 GNG8Q9UK08 70 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 HEMK1Q9Y5R4 338 aaPredicted RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZSCAN5BA6NJL1 495 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 HCKP08631 526 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 FOXN2P32314 431 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 RORCP51449 518 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 UFM1P61960 85 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 NNATQ16517 81 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 FAM69BQ5VUD6 431 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF782Q6ZMW2 699 aaPredicted RBP13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 TREML1Q86YW5 311 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 DOK4Q8TEW6 326 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 DEFB126Q9BYW3 111 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 ZBP1Q9H171 429 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 CXorf21Q9HAI6 301 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
PCDHA11-201ENST00000398640 EFCAB9A8MZ26 197 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 C6orf47O95873 294 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 AHSGP02765 367 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 H1F0P07305 194 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 HOXD13P35453 343 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 MAN2A2P49641 1150 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PTCHD3Q3KNS1 767 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PDCD4Q53EL6 469 aaKnown RBP13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 DCUN1D3Q8IWE4 304 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 C2orf92A0A1B0GVN3 265 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 H7BY64 318 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 L7N2F9 121 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 MANBAO00462 879 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 ITGA10O75578 1167 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 CD72P21854 359 aa13.73□□□□□ -0.21
PCDHA11-201ENST00000398640 RABIFP47224 123 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms