RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 OR1E2P47887 323 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MVDP53602 400 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CAMK1Q14012 370 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CYP27C1Q4G0S4 372 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 FNDC3BQ53EP0 1204 aaKnown RBP17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 Q6ZPB1 254 aaPredicted RBP17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TSEN54Q7Z6J9 526 aaKnown RBP17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CPA6Q8N4T0 437 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 C11orf65Q8NCR3 313 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 OR9A1PQ8NGU1 263 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ACAT2Q9BWD1 397 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ADPRHL2Q9NX46 363 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZNF282Q9UDV7 671 aaPredicted RBP17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TESMINQ9Y4I5 508 aa17.59■□□□□ 0.41
CHRFAM7A-202ENST00000397827 LZTS3O60299 673 aaPredicted RBP17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 POP7O75817 140 aaKnown RBP17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PRNPP04156 253 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SLC35A2P78381 396 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 OXA1LQ15070 435 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MPEG1Q2M385 716 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PERM1Q5SV97 790 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PIWIL3Q7Z3Z3 882 aaKnown RBP17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZNF540Q8NDQ6 660 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HCAR2Q8TDS4 363 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CAPSLQ8WWF8 208 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 REPS1Q96D71 796 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SLC35A5Q9BS91 424 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SORBS1Q9BX66 1292 aaKnown RBP17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RAD21L1Q9H4I0 556 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SPASTQ9UBP0 616 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ENPP5Q9UJA9 477 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 IFT52Q9Y366 437 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PCDHGA10Q9Y5H3 936 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 XIRP2A4UGR9 3374 aa17.58■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TLL1O43897 1013 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 KLK1P06870 262 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CHRNB1P11230 501 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TAS2R50P59544 299 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 C2orf80Q0P641 193 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 DGCR6Q14129 220 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PRSS53Q2L4Q9 553 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 BCL7AQ4VC05 210 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 C9orf64Q5T6V5 341 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 KIAA1614Q5VZ46 1190 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MMP21Q8N119 569 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 APOL4Q9BPW4 351 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 DOHHQ9BU89 302 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SGPP1Q9BX95 441 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.4
CHRFAM7A-202ENST00000397827 KLHL18O94889 574 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 C9P02748 559 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PCGF2P35227 344 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MAPK9P45984 424 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TPTEP56180 551 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RPP38P78345 283 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 NPRL3Q12980 569 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CAMK2GQ13555 558 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CTF1Q16619 201 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FAM83HQ6ZRV2 1179 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FAM124AQ86V42 546 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 BPHLQ86WA6 291 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SLC5A11Q8WWX8 675 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 EFCAB11Q9BUY7 163 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 BHLHE41Q9C0J9 482 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 DUSP21Q9H596 190 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TRIM39Q9HCM9 518 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CORO2BQ9UQ03 480 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FURINP09958 794 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PPIBP23284 216 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 LSM3P62310 102 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FOXD4Q12950 439 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MAD2L1BPQ15013 274 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 GPR153Q6NV75 609 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FAHD1Q6P587 224 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MMAAQ8IVH4 418 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 LRRC56Q8IYG6 542 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CELF5Q8N6W0 485 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 C12orf76Q8N812 135 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FBXO15Q8NCQ5 510 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 OR52J3Q8NH60 311 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RORBQ92753 470 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ZNF707Q96C28 371 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ZCCHC2Q9C0B9 1178 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ATP6V1HQ9UI12 483 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TPRKBQ9Y3C4 175 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MAP4K5Q9Y4K4 846 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CLPXO76031 633 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FADS2O95864 444 aaKnown RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MT-ND2P03891 347 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ADRB3P13945 408 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ALDH4A1P30038 563 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MASP1P48740 699 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SELENOWP63302 87 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SELENBP1Q13228 472 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PAGE2BQ5JRK9 111 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 NXPE4Q6UWF7 544 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TSPYL5Q86VY4 417 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 LAS2Q8IYD9 372 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 OR7G1Q8NGA0 311 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms