RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PLCE1Q9P212 2302 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TTC34A8MYJ7 566 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CSNK2A2P19784 350 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 HIST1H1TP22492 207 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TUBA1BP68363 451 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 UGT8Q16880 541 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 SLC2A7Q6PXP3 512 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TUBA1AQ71U36 451 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 GRAMD2AQ8IUY3 354 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 LRRN4Q8WUT4 740 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 NPAS2Q99743 824 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 MENTQ9BUN1 341 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 MCOLN1Q9GZU1 580 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ERVMER34-1Q9H9K5 563 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 C3orf14Q9HBI5 128 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ADAMTS6Q9UKP5 1117 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 POFUT2Q9Y2G5 429 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 DLGAP4Q9Y2H0 992 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 NBASA2RRP1 2371 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 JRKO75564 520 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CTSLP07711 333 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 SLC35G6P0C7Q6 338 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 LINC00032P0C843 101 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 MTHFD1P11586 935 aaKnown RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 AKT2P31751 481 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 FOXA1P55317 472 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 UFM1P61960 85 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 IFI44LQ53G44 452 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PYCR3Q53H96 274 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CYBRD1Q53TN4 286 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 BROXQ5VW32 411 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 SYT13Q7L8C5 426 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 BPHLQ86WA6 291 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 OFCC1Q8IZS5 231 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CBR4Q8N4T8 237 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 NETO2Q8NC67 525 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF555Q8NEP9 628 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 RIT1Q92963 219 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PHF7Q9BWX1 381 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TEX12Q9BXU0 123 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 RBM38Q9H0Z9 239 aaKnown RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 HCFC1R1Q9NWW0 138 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 FAM32AQ9Y421 112 aaKnown RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 FAM170AA1A519 330 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 A6NCN8 305 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ACRP10323 421 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ACADMP11310 421 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PTPRRQ15256 657 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TBCEQ15813 527 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 NRG4Q8WWG1 115 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ACTR10Q9NZ32 417 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 WNT16Q9UBV4 365 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TIMM22Q9Y584 194 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 KIF26BQ2KJY2 2108 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 RALGAPA1Q6GYQ0 2036 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 FADS2P1A8MWK0 482 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF749O43361 778 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 NTSP30990 170 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TAS2R38P59533 333 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CYP4Z1Q86W10 505 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 C8orf59Q8N0T1 100 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TP53I13Q8NBR0 393 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 YIPF2Q9BWQ6 316 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 B3GNT3Q9Y2A9 372 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 WASHC1A8K0Z3 465 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 COX7A2P14406 83 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 IL12AP29459 219 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 WNT3P56703 355 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 SLBPQ14493 270 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ZIC1Q15915 447 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TCTE1Q5JU00 501 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PAGE3Q5JUK9 113 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TMEM201Q5SNT2 666 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 KDM4DQ6B0I6 523 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CMIPQ8IY22 773 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 UBALD2Q8IYN6 164 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 AUTS2Q8WXX7 1259 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PPM1MQ96MI6 270 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CHST8Q9H2A9 424 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 DLGAP2Q9P1A6 1054 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ANKRD11Q6UB99 2663 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ANKRD61A6NGH8 418 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 IFNW1P05000 195 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 MVDP53602 400 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 SUZ12Q15022 739 aaKnown RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PON2Q15165 354 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 INAVAQ3KP66 663 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CCDC92Q53HC0 331 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ARMC4Q5T2S8 1044 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ARMCX6Q7L4S7 300 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 OR2A1Q8NGT9 310 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 DGCR6LQ9BY27 220 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PBX4Q9BYU1 374 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 CTSOP43234 321 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 VITQ6UXI7 678 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 USP53Q70EK8 1073 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PAQR7Q86WK9 346 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 LGI4Q8N135 537 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 SPEM1Q8N4L4 309 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms