RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 EPGNQ6UW88 154 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 COMMD6Q7Z4G1 85 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 PDSS2Q86YH6 399 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 RFWD2Q8NHY2 731 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 MVB12AQ96EY5 273 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 MMABQ96EY8 250 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 QRFPRQ96P65 431 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 ROGDIQ9GZN7 287 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 WDR55Q9H6Y2 383 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 LHX9Q9NQ69 397 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 DCTN4Q9UJW0 460 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 CDC14AQ9UNH5 594 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 GOLGA8QA0A0J9YX86 632 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 GOLGA8OA6NCC3 632 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ZNF860A6NHJ4 632 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 NPIPB8E9PQR5 432 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 GOLGA8NF8WBI6 632 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 SGK494L7N484 410 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 NVLO15381 856 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 STK17BO94768 372 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 NSA2O95478 260 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ATXN8OSP0DMR3 200 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ATP5A1P25705 553 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 EPHA3P29320 983 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ATP6AP1LQ52LC2 224 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 NIPAL1Q6NVV3 410 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ZNF793Q6ZN11 406 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 PAGE2Q7Z2X7 111 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 NUDT13Q86X67 352 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ZFAND4Q86XD8 727 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 PROKR1Q8TCW9 393 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 ZNF717Q9BY31 904 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 AKTIPQ9H8T0 292 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 AK5Q9Y6K8 562 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 MAU2Q9Y6X3 613 aa22.38■■□□□ 1.17
TSPAN4-203ENST00000397397 B3GALT2O43825 422 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 RDH16O75452 317 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 EEDO75530 441 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 KLK1P06870 262 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 HIST1H1TP22492 207 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 CERS1P27544 350 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 SLC5A2P31639 672 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 TSFMP43897 325 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 OR1D4P47884 311 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 MTTPP55157 894 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 RPL38P63173 70 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 SF3A3Q12874 501 aaKnown RBP eCLIP22.37■■□□□ 1.173e-13■■■■■ 49.7
TSPAN4-203ENST00000397397 RTP5Q14D33 572 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 NXNQ6DKJ4 435 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 PRMT9Q6P2P2 845 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 IGF2-ASQ6U949 168 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 AMER3Q8N944 861 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 ACOT4Q8N9L9 421 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 GALNT6Q8NCL4 622 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 GBP5Q96PP8 586 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 SERINC2Q96SA4 455 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 SIKE1Q9BRV8 207 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 FAM107BQ9H098 131 aa22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 NSRP1Q9H0G5 558 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-203ENST00000397397 TRABD2BA6NFA1 517 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 H0YIG0 161 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 MYO1DO94832 1006 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 RORAP35398 523 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 IDH3AP50213 366 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 C6orf136Q5SQH8 315 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 ACAD11Q709F0 780 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 NXPE2Q96DL1 559 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 METTL2AQ96IZ6 378 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 MAELQ96JY0 434 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 LRFN5Q96NI6 719 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 EBF4Q9BQW3 602 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 DDX31Q9H8H2 851 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 ZNF304Q9HCX3 659 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 ADAM29Q9UKF5 820 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 NEUROG3Q9Y4Z2 214 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 TMEM184BQ9Y519 407 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 PCDHGA7Q9Y5G6 932 aa22.36■■□□□ 1.17
TSPAN4-203ENST00000397397 A0A0G2JND7 137 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 ARHGAP10A1A4S6 786 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 CDRT15L2A8MXV6 281 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 MEN1O00255 615 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 PCDH7O60245 1069 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 GBAP04062 536 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 KLK3P07288 261 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 ITGAXP20702 1163 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 DRD4P21917 467 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 TIA1P31483 386 aaKnown RBP eCLIP22.35■■□□□ 1.171e-7■□□□□ 8.4
TSPAN4-203ENST00000397397 OLR1P78380 273 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 RAE1P78406 368 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 ABHD18Q0P651 414 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 KIAA0040Q15053 153 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 RFTN2Q52LD8 501 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 CCNYL2Q5T2Q4 361 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 CYP20A1Q6UW02 462 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 LARP4Q71RC2 724 aaKnown RBP eCLIP22.35■■□□□ 1.178e-7■■■■■ 32.5
TSPAN4-203ENST00000397397 CPLX4Q7Z7G2 160 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 DSELQ8IZU8 1212 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 FNDC5Q8NAU1 212 aa22.35■■□□□ 1.17
TSPAN4-203ENST00000397397 COL26A1Q96A83 441 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms