RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 EHD1Q9H4M9 534 aa11.34□□□□□ -0.59
GAPDH-202ENST00000396856 NT5DC2Q9H857 520 aa11.34□□□□□ -0.59
GAPDH-202ENST00000396856 SMYD2Q9NRG4 433 aa11.34□□□□□ -0.59
GAPDH-202ENST00000396856 GRHL1Q9NZI5 618 aa11.34□□□□□ -0.59
GAPDH-202ENST00000396856 MTO1Q9Y2Z2 717 aaKnown RBP11.34□□□□□ -0.59
GAPDH-202ENST00000396856 NCF1BA6NI72 391 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 FAM159BA6NKW6 160 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 NCF1CA8MVU1 366 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CXorf49A8MYA2 514 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CLGNO14967 610 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 B4GALT2O60909 372 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 WISP3O95389 354 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 MLYCDO95822 493 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SMIM10L1P0DMW3 83 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 NCF1P14598 390 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SPRP35270 261 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 GGT5P36269 586 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 HNF4AP41235 474 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 GDF5P43026 501 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 OLR1P78380 273 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 MRPS25P82663 173 aaKnown RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 C2orf54Q08AI8 447 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 TUBA3CQ13748 450 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.66e-10■□□□□ 9.9
GAPDH-202ENST00000396856 GLE1Q53GS7 698 aaKnown RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 ZNF766Q5HY98 468 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 TOR1AIP1Q5JTV8 583 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SULT1C3Q6IMI6 304 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 TUBA3EQ6PEY2 450 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SPNS3Q6ZMD2 512 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CRLF3Q8IUI8 442 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.33□□□□□ -0.66e-8■■■■□ 20.7
GAPDH-202ENST00000396856 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 ADAMTS18Q8TE60 1221 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CREB3L4Q8TEY5 395 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 SMIM10Q96HG1 83 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 FAR2Q96K12 515 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 NPLQ9BXD5 320 aaPredicted RBP11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CAB39LQ9H9S4 337 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 WWOXQ9NZC7 414 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 COPG2Q9UBF2 871 aa11.33□□□□□ -0.6
GAPDH-202ENST00000396856 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 TCRBV16S1A1N1A0A5B0 115 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 SYNDIG1LA6NDD5 238 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 ANKDD1BA6NHY2 528 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 SAGE2PA6NJ88 616 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 PHGDHO43175 533 aaKnown RBP11.32□□□□□ -0.6
GAPDH-202ENST00000396856 CTIFO43310 598 aaKnown RBP11.32□□□□□ -0.6
GAPDH-202ENST00000396856 CLEC3AO75596 197 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 PIAS1O75925 651 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 B3GALT4O96024 378 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 S100BP04271 92 aaPredicted RBP11.32□□□□□ -0.6
GAPDH-202ENST00000396856 CD46P15529 392 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 STX2P32856 288 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 PLTPP55058 493 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 RAB10P61026 200 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 NAB1Q13506 487 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 SLBPQ14493 270 aaKnown RBP eCLIP11.32□□□□□ -0.6
GAPDH-202ENST00000396856 NAA30Q147X3 362 aaPredicted RBP11.32□□□□□ -0.6
GAPDH-202ENST00000396856 ZKSCAN8Q15776 578 aaPredicted RBP11.32□□□□□ -0.6
GAPDH-202ENST00000396856 GRTP1Q5TC63 336 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 FCRLBQ6BAA4 426 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 GFRALQ6UXV0 394 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 CTAGE3PQ8IX95 158 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 TMEM178AQ8NBL3 297 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 MDS2Q8NDY4 140 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 ELP5Q8TE02 316 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 KLHL31Q9H511 634 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 DNAJC11Q9NVH1 559 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 MMACHCQ9Y4U1 282 aa11.32□□□□□ -0.6
GAPDH-202ENST00000396856 ABCA2Q9BZC7 2435 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 IGKV3D-11A0A0A0MRZ8 115 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 LRIT2A6NDA9 550 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 GABRR3A8MPY1 467 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 CLDN4O14493 209 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 TAPBPO15533 448 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 ERI3O43414 337 aaKnown RBP11.31□□□□□ -0.6
GAPDH-202ENST00000396856 DNAJB6O75190 326 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 STK16O75716 305 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 CD1DP15813 335 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 EEF1DP29692 281 aaKnown RBP11.31□□□□□ -0.6
GAPDH-202ENST00000396856 CD96P40200 585 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 KCNK10P57789 538 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 GPX6P59796 221 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 BTN3A2P78410 334 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 OC90Q02509 493 aaPredicted RBP11.31□□□□□ -0.6
GAPDH-202ENST00000396856 RBPJQ06330 500 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 LAPTM5Q13571 262 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 RCN2Q14257 317 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 TERF2Q15554 542 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 OR1C1Q15619 314 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 PDK4Q16654 411 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 C18orf21Q32NC0 220 aaPredicted RBP11.31□□□□□ -0.6
GAPDH-202ENST00000396856 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
GAPDH-202ENST00000396856 CCDC91Q7Z6B0 441 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms