RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 KCTD4Q8WVF5 259 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 MS4A6EQ96DS6 147 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 PEX11GQ96HA9 241 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 FAR2Q96K12 515 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 PAFAH2Q99487 392 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 TRIM4Q9C037 500 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 ROGDIQ9GZN7 287 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 KLHL31Q9H511 634 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 PSD3Q9NYI0 1048 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 HCN3Q9P1Z3 774 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 SHANK1Q9Y566 2161 aa10.45□□□□□ -0.74
NDUFA9-202ENST00000396655 CLEC18AA5D8T8 446 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SUPT3HB4E1H0 165 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 UBXN8O00124 270 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 MASP2O00187 686 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 PSMD12O00232 456 aaPredicted RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 CCNT2O60583 730 aaKnown RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 PRMT3O60678 531 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 VPS4BO75351 444 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SUPT3HO75486 399 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SNRPAP09012 282 aaKnown RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 MYBL2P10244 700 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 EPORP19235 508 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 TSFMP43897 325 aaKnown RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 RAB8AP61006 207 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 CHIT1Q13231 466 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 BMPR2Q13873 1038 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 ABRAXAS2Q15018 415 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SETDB1Q15047 1291 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 TERF2Q15554 542 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 IGFBP7Q16270 282 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 C10orf62Q5T681 223 aaPredicted RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 LIPJQ5W064 366 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 TRIM40Q6P9F5 258 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 CLEC18BQ6UXF7 455 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 TIFABQ6ZNK6 161 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 CHSY3Q70JA7 882 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SNX31Q8N9S9 440 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 CLEC18CQ8NCF0 446 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 ARMC2Q8NEN0 867 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 OR5T3Q8NGG3 340 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 DNAJB14Q8TBM8 379 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 MRRFQ96E11 262 aaKnown RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SERINC2Q96SA4 455 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 LPAR4Q99677 370 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 MESP1Q9BRJ9 268 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 TBCDQ9BTW9 1192 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 REXO4Q9GZR2 422 aaKnown RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 ILKAPQ9H0C8 392 aaPredicted RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 L2HGDHQ9H9P8 463 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 ZBTB20Q9HC78 741 aaPredicted RBP10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 MMP25Q9NPA2 562 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 NFU1Q9UMS0 254 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 VPS4AQ9UN37 437 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 PLAAQ9Y263 795 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 MMACHCQ9Y4U1 282 aa10.44□□□□□ -0.74
NDUFA9-202ENST00000396655 SPTBN1Q01082 2364 aaKnown RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 IGKV3D-11A0A0A0MRZ8 115 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 DYTNA2CJ06 578 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 BLACEA4D250 179 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 CLDN4O14493 209 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ERI3O43414 337 aaKnown RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 B3GALT2O43825 422 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 TBX6O95947 436 aaPredicted RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 GFAPP14136 432 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 CD22P20273 847 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 HNRNPH1P31943 449 aaKnown RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 PIK3CBP42338 1070 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 MTTPP55157 894 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 HSD17B7P56937 341 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 BTN3A2P78410 334 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 IRF9Q00978 393 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 EEF1A2Q05639 463 aaKnown RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ACTN3Q08043 901 aaPredicted RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ZNF169Q14929 603 aaPredicted RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 PFKFB4Q16877 469 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 TOR1AIP1Q5JTV8 583 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 MFSD4BQ5TF39 518 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 FAAH2Q6GMR7 532 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 GRHL2Q6ISB3 625 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 MED27Q6P2C8 311 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ABHD17CQ6PCB6 329 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ADGRD1Q6QNK2 874 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 VN1R5Q7Z5H4 357 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ZNF595Q8IYB9 648 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 LGI4Q8N135 537 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 OR7G3Q8NG95 312 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 BRIX1Q8TDN6 353 aaKnown RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ZNF473Q8WTR7 871 aaKnown RBP10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 DCAKDQ8WVC6 231 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ESAMQ96AP7 390 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 CMTM7Q96FZ5 175 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 ZNF354BQ96LW1 612 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 PTCHD1Q96NR3 888 aa10.43□□□□□ -0.74
NDUFA9-202ENST00000396655 QRFPRQ96P65 431 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms