RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FBP2O00757 339 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 ATP1B2P14415 290 aaPredicted RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 GRIK2Q13002 908 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 REEP3Q6NUK4 255 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 NPAS3Q8IXF0 933 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 PEX13Q92968 403 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF599Q96NL3 588 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 SRRDQ9UH36 339 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 MAGED1Q9Y5V3 778 aaPredicted RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 NEMP2A6NFY4 417 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 TMEM233B4DJY2 109 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 KHNYNO15037 678 aaKnown RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 IL33O95760 270 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 HRGP04196 525 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 ALDH3B2P48448 385 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 PPP1R8Q12972 351 aaKnown RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF423Q2M1K9 1284 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 NOXRED1Q6NXP6 359 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 DUS1LQ6P1R4 473 aaKnown RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 BORAQ6PGQ7 559 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 RNF130Q86XS8 419 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 PHOSPHO1Q8TCT1 267 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 NDUFAF4Q9P032 175 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 IRAK2O43187 625 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 IFNGR1P15260 489 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 DNASE1P24855 282 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 TMPRSS9Q7Z410 1059 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 POTEKPQ9BYX7 375 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 POLMQ9NP87 494 aaPredicted RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 FAM159BA6NKW6 160 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 RPL10P27635 214 aaKnown RBP13.52□□□□□ -0.25
COL4A3-202ENST00000396578 CSKP41240 450 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 HTR2BP41595 481 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 MAGEA6P43360 314 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 MAP2K3P46734 347 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 CD97P48960 835 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 SSTP61278 116 aa13.52□□□□□ -0.25
COL4A3-202ENST00000396578 APOC3P02656 99 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 SELPP16109 830 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 PDSS1Q5T2R2 415 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 OR13C4Q8NGS5 318 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 FN3KQ9H479 309 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 LIN28AQ9H9Z2 209 aaKnown RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 CPQQ9Y646 472 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 A0A0G2JMP0 313 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 A8MUA0 341 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TRAPPC6AO75865 159 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TNFP01375 233 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF182P17025 639 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 CFL1P23528 166 aaKnown RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 CHRNA4P43681 627 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF630Q2M218 657 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 RPL13AP3Q6NVV1 102 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 OR4M2Q8NGB6 313 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TFAP2BQ92481 460 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 SLCO2A1Q92959 643 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 OR4K3Q96R72 315 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ZDHHC18Q9NUE0 388 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 IFNA10P01566 189 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 UNGP13051 313 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 CDKN2CP42773 168 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 CDNFQ49AH0 187 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 SYT4Q9H2B2 425 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF701Q9NV72 531 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 KLF11O14901 512 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TFPTP0C1Z6 253 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 PTPN2P17706 415 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ZDHHC24Q6UX98 284 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 PIM3Q86V86 326 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 OR4F6Q8NGB9 312 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ARL6Q9H0F7 186 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 A0A1W2PPL8 197 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TOXO94900 526 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 RASAL1O95294 804 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 GNSP15586 552 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ACTC1P68032 377 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ACTA1P68133 377 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF616Q08AN1 781 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 GRIK5Q16478 980 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 CARD16Q5EG05 197 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 SLC39A4Q6P5W5 647 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 OR5M3Q8NGP4 307 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 OR10Q1Q8NGQ4 319 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 TMEM74Q96NL1 305 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 ST6GALNAC4Q9H4F1 302 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 RGS9O75916 674 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-202ENST00000396578 G6PDP11413 515 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
COL4A3-202ENST00000396578 A0A0J9YVX5 310 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms