RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TMEM179BQ7Z7N9 219 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 NAGSQ8N159 534 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 NATD1Q8N6N6 113 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 ZNF555Q8NEP9 628 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 TTLQ8NG68 377 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 RGMAQ96B86 450 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 MBOAT4Q96T53 435 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 YTHDF1Q9BYJ9 559 aaKnown RBP14.28□□□□□ -0.12
CBX3-202ENST00000396386 RBM38Q9H0Z9 239 aaKnown RBP14.28□□□□□ -0.12
CBX3-202ENST00000396386 VNN3Q9NY84 501 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 RAPGEFL1Q9UHV5 662 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 ADAM29Q9UKF5 820 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 ACSL6Q9UKU0 697 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 ORC6Q9Y5N6 252 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 CDH23Q9H251 3354 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 TRBC2A0A5B9 178 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 TRIM64A6NGJ6 449 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 hCG_2039718K7EN88 272 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 HS6ST1O60243 411 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 NOBOXO60393 691 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 TNFRSF21O75509 655 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 CLEC3AO75596 197 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 FKBP9O95302 570 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 KRT75O95678 551 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 ETFAP13804 333 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 ALDH3B2P48448 385 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 CDH15P55291 814 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 ITGA1P56199 1179 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 NFATC4Q14934 902 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 PRSS53Q2L4Q9 553 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 RFX4Q33E94 735 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 COX20Q5RI15 118 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 BORAQ6PGQ7 559 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 ADGRF3Q8IZF5 1079 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 MMP21Q8N119 569 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 OR2A1Q8NGT9 310 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 NCSTNQ92542 709 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 MAL2Q969L2 176 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 DGCR14Q96DF8 476 aaKnown RBP14.27□□□□□ -0.12
CBX3-202ENST00000396386 MRGPRX1Q96LB2 322 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 MRPS30Q9NP92 439 aaKnown RBP14.27□□□□□ -0.12
CBX3-202ENST00000396386 PRDM8Q9NQV8 689 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 C3orf18Q9UK00 162 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 HEATR5BQ9P2D3 2071 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 C5orf42Q9H799 3197 aa14.27□□□□□ -0.12
CBX3-202ENST00000396386 IGKV1-8A0A0C4DH67 115 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 TRIM64CA6NLI5 447 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 SCAMP1O15126 338 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 PDPK1O15530 556 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 AHCYL1O43865 530 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 FESP07332 822 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 GSTT1P30711 240 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 GRK3P35626 688 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 RAD23AP54725 363 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 ABATP80404 500 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 VLDLRP98155 873 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 HEPACAMQ14CZ8 416 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 EOGTQ5NDL2 527 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 PIWIL3Q7Z3Z3 882 aaKnown RBP14.27□□□□□ -0.13
CBX3-202ENST00000396386 TRIM69Q86WT6 500 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 C8orf59Q8N0T1 100 aaPredicted RBP14.27□□□□□ -0.13
CBX3-202ENST00000396386 ARL10Q8N8L6 244 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 OR5AK3PQ8NH89 298 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 DNASE1L2Q92874 299 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 TM4SF18Q96CE8 201 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 PDXPQ96GD0 296 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 TPD52L3Q96J77 140 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 WDR92Q96MX6 357 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 MUS81Q96NY9 551 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 TMEM38AQ9H6F2 299 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 GPATCH2Q9NW75 528 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 FAM118AQ9NWS6 357 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 U3KQV3 271 aa14.27□□□□□ -0.13
CBX3-202ENST00000396386 LRP4O75096 1905 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 POM121BA6NF01 834 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 CCDC160A6NGH7 325 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 SUV39H1O43463 412 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 NDUFV2P19404 249 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 UQCRC2P22695 453 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 GSTM2P28161 218 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 AQP1P29972 269 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 SHMT2P34897 504 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 ARHGDIAP52565 204 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 TPD52P55327 224 aaPredicted RBP14.26□□□□□ -0.13
CBX3-202ENST00000396386 CLDN2P57739 230 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 PPP1R8Q12972 351 aaKnown RBP14.26□□□□□ -0.13
CBX3-202ENST00000396386 SCARB2Q14108 478 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 PLCL1Q15111 1095 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 TBC1D19Q8N5T2 526 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 RPLP0P6Q8NHW5 317 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 OR1E3Q8WZA6 343 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 ZNF764Q96H86 408 aaPredicted RBP14.26□□□□□ -0.13
CBX3-202ENST00000396386 TRIM4Q9C037 500 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 ING2Q9H160 280 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 KIR3DX1Q9H7L2 352 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 SLC6A20Q9NP91 592 aa14.26□□□□□ -0.13
CBX3-202ENST00000396386 LHX9Q9NQ69 397 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms