RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CD274Q9NZQ7 290 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 ITPR2Q14571 2701 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 IGKV3D-11A0A0A0MRZ8 115 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 TCRBV16S1A1N1A0A5B0 115 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 ERI3O43414 337 aaKnown RBP17.15■□□□□ 0.34
FXN-203ENST00000396366 STK16O75716 305 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 UNC5CO95185 931 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 GSTA2P09210 222 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 EPORP19235 508 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 CD22P20273 847 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 SPRP35270 261 aaPredicted RBP17.15■□□□□ 0.34
FXN-203ENST00000396366 HNRNPFP52597 415 aaKnown RBP17.15■□□□□ 0.34
FXN-203ENST00000396366 GUCY2DQ02846 1103 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 CAV1Q03135 178 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 DOC2AQ14183 400 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 OR1C1Q15619 314 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 GRTP1Q5TC63 336 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 SULT1C3Q6IMI6 304 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 FJX1Q86VR8 437 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 TMEM52Q8NDY8 209 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 NFAM1Q8NET5 270 aaPredicted RBP17.15■□□□□ 0.34
FXN-203ENST00000396366 KIAA1191Q96A73 305 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 FAR2Q96K12 515 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 UTP23Q9BRU9 249 aaKnown RBP17.15■□□□□ 0.34
FXN-203ENST00000396366 RAB17Q9H0T7 212 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 ALG9Q9H6U8 611 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 NT5DC2Q9H857 520 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 PRDM9Q9NQV7 894 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 GPRC5BQ9NZH0 403 aa17.15■□□□□ 0.34
FXN-203ENST00000396366 PTBP2Q9UKA9 531 aaKnown RBP17.15■□□□□ 0.34
FXN-203ENST00000396366 GABRR3A8MPY1 467 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 TGFBR3LH3BV60 316 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 PSMD12O00232 456 aaPredicted RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 CLGNO14967 610 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 ZG16O60844 167 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 STSP08842 583 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 SLC35E2BP0CK96 405 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 PLA2G16P53816 162 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 STXBP1P61764 594 aaKnown RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 ILF2Q12905 390 aaKnown RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 XKR6Q5GH73 641 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 UBAP2Q5T6F2 1119 aaKnown RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 GFRALQ6UXV0 394 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 ZNF572Q7Z3I7 529 aaPredicted RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 ISCA2Q86U28 154 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 RPS19BP1Q86WX3 136 aaKnown RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 KRT78Q8N1N4 520 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 TCAIMQ8N3R3 496 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 SLC5A8Q8N695 610 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 GAL3ST3Q96A11 431 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 MRRFQ96E11 262 aaKnown RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 QRFPRQ96P65 431 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 LRRC1Q9BTT6 524 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 CAPS2Q9BXY5 557 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 CLK4Q9HAZ1 481 aaKnown RBP17.14■□□□□ 0.33
FXN-203ENST00000396366 ABI3Q9P2A4 366 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 COPG2Q9UBF2 871 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 RNF112Q9ULX5 631 aa17.14■□□□□ 0.33
FXN-203ENST00000396366 NOTCH2Q04721 2471 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 ANKDD1BA6NHY2 528 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 SAGE2PA6NJ88 616 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 CCNT2O60583 730 aaKnown RBP17.13■□□□□ 0.33
FXN-203ENST00000396366 CLEC3AO75596 197 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 CRYABP02511 175 aaKnown RBP17.13■□□□□ 0.33
FXN-203ENST00000396366 TFEBP19484 476 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 TPP2P29144 1249 aaPredicted RBP17.13■□□□□ 0.33
FXN-203ENST00000396366 PPP2R1BP30154 601 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 OC90Q02509 493 aaPredicted RBP17.13■□□□□ 0.33
FXN-203ENST00000396366 PDK4Q16654 411 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 CDKL4Q5MAI5 379 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 RAPH1Q70E73 1250 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 PDPRQ8NCN5 879 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 DNAJB8Q8NHS0 232 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 F2RL3Q96RI0 385 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 CD244Q9BZW8 370 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 CNOT10Q9H9A5 744 aaKnown RBP17.13■□□□□ 0.33
FXN-203ENST00000396366 IGSF5Q9NSI5 407 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 SEC14L3Q9UDX4 400 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 CLDN16Q9Y5I7 305 aa17.13■□□□□ 0.33
FXN-203ENST00000396366 MYO7BQ6PIF6 2116 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 MYOCOSA0A1B0GUC4 107 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 NEURL1O76050 574 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 MYBL2P10244 700 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 DCTP40126 519 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 TAS2R50P59544 299 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 IRF9Q00978 393 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 CHIT1Q13231 466 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 BMPR2Q13873 1038 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 ADPRMQ3LIE5 342 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 FAM47BQ8NA70 645 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 TTLQ8NG68 377 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 OR2L5Q8NG80 312 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 NXNL1Q96CM4 212 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 WDR34Q96EX3 536 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 PTCD3Q96EY7 689 aaKnown RBP17.12■□□□□ 0.33
FXN-203ENST00000396366 SCMH1Q96GD3 660 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 CSF3RQ99062 836 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 PHACTR1Q9C0D0 580 aa17.12■□□□□ 0.33
FXN-203ENST00000396366 REXO4Q9GZR2 422 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms