RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FAM214AQ32MH5 1076 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 SNAP47Q5SQN1 464 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 WASHC2DQ5SRD0 308 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 FRMPD2BQ6IN97 320 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 DNAJB8Q8NHS0 232 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.32
VAPB-202ENST00000395802 NUDT22Q9BRQ3 303 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 CLMPQ9H6B4 373 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 FAM60AQ9NP50 221 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 LYARQ9NX58 379 aaKnown RBP13.02□□□□□ -0.32
VAPB-202ENST00000395802 MS4A12Q9NXJ0 267 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 SERTAD3Q9UJW9 196 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 SPACA6W5XKT8 324 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 LOC105369274A0A096LPK9 316 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 LOC102723532A0A0G2JNH3 316 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 A0A1W2PQM1 296 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 NR5A2O00482 541 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 SCELO95171 688 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 CDK4P11802 303 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 CD59P13987 128 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 ALOX12P18054 663 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 TPP2P29144 1249 aaPredicted RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 ELF3P78545 371 aaPredicted RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 CFHR1Q03591 330 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 GRM7Q14831 915 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 MSANTD1Q6ZTZ1 278 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 GPR135Q8IZ08 494 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 OR4N4Q8N0Y3 316 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 KCT2Q8NC54 265 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 OR9I1Q8NGQ6 314 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 ZNF285Q96NJ3 590 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 TMEM74Q96NL1 305 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 SERINC2Q96SA4 455 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 RMND5AQ9H871 391 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 CLK4Q9HAZ1 481 aaKnown RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 MIEF1Q9NQG6 463 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 PRDM7Q9NQW5 492 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 ENAMQ9NRM1 1142 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 LEF1Q9UJU2 399 aaPredicted RBP13.02□□□□□ -0.33
VAPB-202ENST00000395802 HCN4Q9Y3Q4 1203 aa13.02□□□□□ -0.33
VAPB-202ENST00000395802 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
VAPB-202ENST00000395802 UNC13CQ8NB66 2214 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 A0A0A6YYD5 115 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 TMX2-CTNND1H3BSU7 103 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 B3GALT2O43825 422 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 NPPAP01160 153 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 PGRP06401 933 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 COX7A2P14406 83 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 SEPHS1P49903 392 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 TAS2R50P59544 299 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 BTN3A2P78410 334 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 FAM53BQ14153 422 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 DNAL1Q4LDG9 190 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 YOD1Q5VVQ6 348 aaPredicted RBP13.01□□□□□ -0.33
VAPB-202ENST00000395802 TLDC1Q6P9B6 456 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 C16orf89Q6UX73 402 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 GK5Q6ZS86 529 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 GPR180Q86V85 440 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 BPHLQ86WA6 291 aaPredicted RBP13.01□□□□□ -0.33
VAPB-202ENST00000395802 FUNDC1Q8IVP5 155 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 ACOT4Q8N9L9 421 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 CDC26Q8NHZ8 85 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 C16orf78Q8WTQ4 265 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 NPLQ9BXD5 320 aaPredicted RBP13.01□□□□□ -0.33
VAPB-202ENST00000395802 KLHL31Q9H511 634 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 ACTL8Q9H568 366 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 REEP4Q9H6H4 257 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 ANKHQ9HCJ1 492 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
VAPB-202ENST00000395802 AKAP7Q9P0M2 348 aaPredicted RBP13.01□□□□□ -0.33
VAPB-202ENST00000395802 C4orf47A7E2U8 309 aa13□□□□□ -0.33
VAPB-202ENST00000395802 A8MU76 341 aa13□□□□□ -0.33
VAPB-202ENST00000395802 NTN3O00634 580 aaPredicted RBP13□□□□□ -0.33
VAPB-202ENST00000395802 SH3BP5O60239 455 aa13□□□□□ -0.33
VAPB-202ENST00000395802 PRAMEF10O60809 474 aa13□□□□□ -0.33
VAPB-202ENST00000395802 ZNF888P0CJ79 500 aaPredicted RBP13□□□□□ -0.33
VAPB-202ENST00000395802 SMIM10L1P0DMW3 83 aa13□□□□□ -0.33
VAPB-202ENST00000395802 DRD2P14416 443 aa13□□□□□ -0.33
VAPB-202ENST00000395802 TACR1P25103 407 aa13□□□□□ -0.33
VAPB-202ENST00000395802 ATP5A1P25705 553 aaKnown RBP13□□□□□ -0.33
VAPB-202ENST00000395802 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
VAPB-202ENST00000395802 S100A3P33764 101 aa13□□□□□ -0.33
VAPB-202ENST00000395802 KIR3DL1P43629 444 aa13□□□□□ -0.33
VAPB-202ENST00000395802 RAB8AP61006 207 aa13□□□□□ -0.33
VAPB-202ENST00000395802 SLAMF1Q13291 335 aa13□□□□□ -0.33
VAPB-202ENST00000395802 MUM1Q2TAK8 710 aa13□□□□□ -0.33
VAPB-202ENST00000395802 HKDC1Q2TB90 917 aa13□□□□□ -0.33
VAPB-202ENST00000395802 FAM174BQ3ZCQ3 159 aa13□□□□□ -0.33
VAPB-202ENST00000395802 VPS26BQ4G0F5 336 aa13□□□□□ -0.33
VAPB-202ENST00000395802 CPTPQ5TA50 214 aa13□□□□□ -0.33
VAPB-202ENST00000395802 ANXA8L1Q5VT79 327 aa13□□□□□ -0.33
VAPB-202ENST00000395802 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
VAPB-202ENST00000395802 CAMKMTQ7Z624 323 aa13□□□□□ -0.33
VAPB-202ENST00000395802 UBE3DQ7Z6J8 389 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms