RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SIGLEC10Q96LC7 697 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 KLHL31Q9H511 634 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 LZTFL1Q9NQ48 299 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 PLSCR2Q9NRY7 297 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 MYO1DO94832 1006 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 NADKO95544 446 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-203ENST00000394925 AHRP35869 848 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 MAGEA3P43357 314 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 EMC4Q5J8M3 183 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 C2CD4AQ8NCU7 369 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-203ENST00000394925 SLC5A11Q8WWX8 675 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 POM121Q96HA1 1249 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 SEC16BQ96JE7 1060 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 PDLIM2Q96JY6 352 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 TSNARE1Q96NA8 513 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 TRIM54Q9BYV2 358 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 SLC6A16Q9GZN6 736 aa19.69■□□□□ 0.74
TRAF4-203ENST00000394925 CLK4Q9HAZ1 481 aaKnown RBP19.69■□□□□ 0.74
TRAF4-203ENST00000394925 URADA6NGE7 173 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 GUCA1CO95843 209 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 GABRB3P28472 473 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 AP1S2P56377 157 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 NUP107P57740 925 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 CES4AQ5XG92 561 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 CA13Q8N1Q1 262 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 ANKRD53Q8N9V6 530 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 NRGNQ92686 78 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 TIMMDC1Q9NPL8 285 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 PNO1Q9NRX1 252 aaKnown RBP19.68■□□□□ 0.74
TRAF4-203ENST00000394925 KCMF1Q9P0J7 381 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 ZNF223Q9UK11 482 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-203ENST00000394925 ERVK-11Q9UQG0 969 aa19.68■□□□□ 0.74
TRAF4-203ENST00000394925 PRRC2AP48634 2157 aaKnown RBP19.68■□□□□ 0.74
TRAF4-203ENST00000394925 C4orf51C9J302 202 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 NPIPA2E9PIF3 369 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 NPIPA3F8WFD2 350 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 TUBB4AP04350 444 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 HOXD4P09016 255 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-203ENST00000394925 SMIM10L1P0DMW3 83 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 DNAJA1P31689 397 aaKnown RBP19.67■□□□□ 0.74
TRAF4-203ENST00000394925 SSR4P51571 173 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 PGGT1BP53609 377 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 IL2P60568 153 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 REEP5Q00765 189 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 MYBPHQ13203 477 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 RBBP5Q15291 538 aaKnown RBP19.67■□□□□ 0.74
TRAF4-203ENST00000394925 C16orf47Q6ZP98 133 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-203ENST00000394925 KIAA0408Q6ZU52 694 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 TRPV3Q8NET8 790 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 OR5M3Q8NGP4 307 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 ATL1Q8WXF7 558 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 MAGOHBQ96A72 148 aaKnown RBP19.67■□□□□ 0.74
TRAF4-203ENST00000394925 FBXL8Q96CD0 374 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 VMP1Q96GC9 406 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 SMIM10Q96HG1 83 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 DEPPQ9NTK1 212 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 KCNN3Q9UGI6 736 aa19.67■□□□□ 0.74
TRAF4-203ENST00000394925 PINLYPA6NC86 204 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 FAM166BA8MTA8 275 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 PPP2R1BP30154 601 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 PPIAP62937 165 aaKnown RBP19.66■□□□□ 0.74
TRAF4-203ENST00000394925 PLGLB1Q02325 96 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 TOR1AIP1Q5JTV8 583 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 PAOXQ6QHF9 649 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 ACAD11Q709F0 780 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 PSD4Q8NDX1 1056 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 NCLNQ969V3 563 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 AIF1LQ9BQI0 150 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 CCDC77Q9BR77 488 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 LIN28AQ9H9Z2 209 aaKnown RBP19.66■□□□□ 0.74
TRAF4-203ENST00000394925 YARS2Q9Y2Z4 477 aaKnown RBP19.66■□□□□ 0.74
TRAF4-203ENST00000394925 DYRK1BQ9Y463 629 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 MMACHCQ9Y4U1 282 aa19.66■□□□□ 0.74
TRAF4-203ENST00000394925 ACANP16112 2415 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 EML6Q6ZMW3 1958 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 A8MVJ9 347 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 PRKNO60260 465 aaPredicted RBP19.65■□□□□ 0.74
TRAF4-203ENST00000394925 AHSGP02765 367 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 CD99P14209 185 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 IST1P53990 364 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 BTN3A2P78410 334 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 PDAP1Q13442 181 aaKnown RBP19.65■□□□□ 0.74
TRAF4-203ENST00000394925 CRYMQ14894 314 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 TERF2Q15554 542 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 GXYLT1Q4G148 440 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 HECTD2Q5U5R9 776 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 TMPRSS11BQ86T26 416 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 NAT8LQ8N9F0 302 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 OR5M9Q8NGP3 310 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 OR10Q1Q8NGQ4 319 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 AICDAQ9GZX7 198 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 PELI2Q9HAT8 420 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 PNPLA3Q9NST1 481 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 HPF1Q9NWY4 346 aa19.65■□□□□ 0.74
TRAF4-203ENST00000394925 ZNF469Q96JG9 3925 aaPredicted RBP19.65■□□□□ 0.74
TRAF4-203ENST00000394925 ABCA4P78363 2273 aa19.64■□□□□ 0.74
TRAF4-203ENST00000394925 ZFAND5O76080 213 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 ZWINTO95229 277 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 SERPINA6P08185 405 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 PGAM1P18669 254 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms