RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 G6PC3Q9BUM1 346 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 REEP4Q9H6H4 257 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 OR5K4A6NMS3 321 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 M0R2N6 131 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 SCO2O43819 266 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 CDC40O60508 579 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 CREG1O75629 220 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 IFNA21P01568 189 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ASGR2P07307 311 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 GRK5P34947 590 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 PMS2P3Q13401 168 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MRPL49Q13405 166 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 DPY19L3Q6ZPD9 716 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ASB18Q6ZVZ8 466 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 OR10Q1Q8NGQ4 319 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 TMEM234Q8WY98 164 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 NR4A3Q92570 626 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 MAPKAP1Q9BPZ7 522 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 DEFB126Q9BYW3 111 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 C8orf33Q9H7E9 229 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ENY2Q9NPA8 101 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF69Q9UC07 566 aa10.03□□□□□ -0.8
COL4A6-203ENST00000394872 APOBEC3BQ9UH17 382 aaKnown RBP10.03□□□□□ -0.8
COL4A6-203ENST00000394872 C11orf98E9PRG8 122 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 DIRAS1O95057 198 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 FARS2O95363 451 aaKnown RBP10.02□□□□□ -0.8
COL4A6-203ENST00000394872 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.8
COL4A6-203ENST00000394872 SPANXN4Q5MJ08 99 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF678Q5SXM1 525 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF550Q7Z398 422 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 SERINC5Q86VE9 423 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 TXNDC5Q8NBS9 432 aaKnown RBP10.02□□□□□ -0.8
COL4A6-203ENST00000394872 CANT1Q8WVQ1 401 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 CD320Q9NPF0 282 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 MED11Q9P086 117 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 RHCGQ9UBD6 479 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 SUSD2Q9UGT4 822 aa10.02□□□□□ -0.8
COL4A6-203ENST00000394872 LOC100130705A0A1B0GUX0 176 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 C2orf92A0A1B0GVN3 265 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 DPPA5A6NC42 116 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 METTL21EPA6NDL7 271 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 PDLIM1O00151 329 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 HSPA12AO43301 675 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 HCRTR2O43614 444 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 SYPP08247 313 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 EMX2Q04743 252 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 FAM189A2Q15884 450 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF542PQ5EBM4 170 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ACSBG2Q5FVE4 666 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 INO80EQ8NBZ0 244 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 SMG8Q8ND04 991 aaKnown RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 HSPBAP1Q96EW2 488 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 LRIG1Q96JA1 1093 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 POLDIP3Q9BY77 421 aaKnown RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 FZD3Q9NPG1 666 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 VNN3Q9NY84 501 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 B4GALT7Q9UBV7 327 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 TMEM5Q9Y2B1 443 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ZSCAN5BA6NJL1 495 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 PLD2O14939 933 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 TLX2O43763 284 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 NUAK1O60285 661 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 GPR32O75388 356 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 RBMS1P29558 406 aaKnown RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 OR4D2P58180 307 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 LRP8Q14114 963 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 TSTQ16762 297 aaKnown RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 LIPJQ5W064 366 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 PQLC3Q8N755 202 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 OR4K1Q8NGD4 311 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 OSTF1Q92882 214 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 SLCO2A1Q92959 643 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 OR51I1Q9H343 314 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 PPP4R1LQ9P1A2 415 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 PRSS51A0A1B0GVH4 220 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 CDH11P55287 796 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 OR2B6P58173 313 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 FOXK1P85037 733 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 KCNJ9Q92806 393 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 RAB8BQ92930 207 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 POPDC3Q9HBV1 291 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 RFPL2O75678 378 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF806P0C7X5 589 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 S100A1P23297 94 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 EIF2S3P41091 472 aaKnown RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 GPX6P59796 221 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 DHCR24Q15392 516 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ASTE1Q2TB18 679 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 CYBRD1Q53TN4 286 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 LRIF1Q5T3J3 769 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 CARD17Q5XLA6 110 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF283Q8N7M2 679 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 TMEM74Q96NL1 305 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 PCYT2Q99447 389 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.81
COL4A6-203ENST00000394872 ITPAQ9BY32 194 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms