RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ALDH18A1P54886 795 aaKnown RBP28.92■■■□□ 2.22
CMTM4-202ENST00000394106 FAM153CQ494X1 144 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 TECRLQ5HYJ1 363 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 TRIM40Q6P9F5 258 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 CISD2Q8N5K1 135 aaKnown RBP28.92■■■□□ 2.22
CMTM4-202ENST00000394106 SCYL1Q96KG9 808 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 PTCHD1Q96NR3 888 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 NBASA2RRP1 2371 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 MYO18BQ8IUG5 2567 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 UBR5O95071 2799 aaPredicted RBP28.91■■■□□ 2.22
CMTM4-202ENST00000394106 SPENQ96T58 3664 aaKnown RBP28.91■■■□□ 2.22
CMTM4-202ENST00000394106 LRRC14BA6NHZ5 514 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 PRMT3O60678 531 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 TBX6O95947 436 aaPredicted RBP28.91■■■□□ 2.22
CMTM4-202ENST00000394106 ABHD2P08910 425 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 PCNAP12004 261 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 OR4D2P58180 307 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 BTG2P78543 158 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 B3GNTL1Q67FW5 361 aaPredicted RBP28.91■■■□□ 2.22
CMTM4-202ENST00000394106 MED27Q6P2C8 311 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 PAPD4Q6PIY7 484 aaKnown RBP28.91■■■□□ 2.22
CMTM4-202ENST00000394106 OR2L5Q8NG80 312 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 UBE2E3Q969T4 207 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 C19orf60Q96EN9 201 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 F2RL3Q96RI0 385 aa28.91■■■□□ 2.22
CMTM4-202ENST00000394106 A0A088AWK7 358 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 RIPK2O43353 540 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 MAOAP21397 527 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 ZNF10P21506 573 aaPredicted RBP28.9■■■□□ 2.22
CMTM4-202ENST00000394106 ARG2P78540 354 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 RUNX2Q13950 521 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 NAA30Q147X3 362 aaPredicted RBP28.9■■■□□ 2.22
CMTM4-202ENST00000394106 ADPRMQ3LIE5 342 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 PLAG1Q6DJT9 500 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 MYLK4Q86YV6 388 aaPredicted RBP28.9■■■□□ 2.22
CMTM4-202ENST00000394106 GSPT2Q8IYD1 628 aaKnown RBP28.9■■■□□ 2.22
CMTM4-202ENST00000394106 SNRNP40Q96DI7 357 aaKnown RBP28.9■■■□□ 2.22
CMTM4-202ENST00000394106 QRFPRQ96P65 431 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 LPAR4Q99677 370 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 PLA2G3Q9NZ20 509 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 PCDHGA10Q9Y5H3 936 aa28.9■■■□□ 2.22
CMTM4-202ENST00000394106 B3GALT2O43825 422 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 KLK8O60259 260 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 RBP1P09455 135 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 E2F2Q14209 437 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 QSOX2Q6ZRP7 698 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 CYP4X1Q8N118 509 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 GALNT11Q8NCW6 608 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 CATSPER1Q8NEC5 780 aa28.89■■■□□ 2.22
CMTM4-202ENST00000394106 COPS7BQ9H9Q2 264 aaPredicted RBP28.89■■■□□ 2.22
CMTM4-202ENST00000394106 DYTNA2CJ06 578 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 A8MUI8 341 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 SH3BGRLO75368 114 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 SIX3O95343 332 aaPredicted RBP28.88■■■□□ 2.21
CMTM4-202ENST00000394106 F10P00742 488 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 SNRPAP09012 282 aaKnown RBP28.88■■■□□ 2.21
CMTM4-202ENST00000394106 UQCRFS1P47985 274 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 TGM3Q08188 693 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 ZNF169Q14929 603 aaPredicted RBP28.88■■■□□ 2.21
CMTM4-202ENST00000394106 TLR1Q15399 786 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 EXT1Q16394 746 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 TSNAXIP1Q2TAA8 658 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 ABHD17CQ6PCB6 329 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 LAS2Q8IYD9 372 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 NPLQ9BXD5 320 aaPredicted RBP28.88■■■□□ 2.21
CMTM4-202ENST00000394106 KCNK13Q9HB14 408 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 PRDM9Q9NQV7 894 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 ASF1BQ9NVP2 202 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 XPR1Q9UBH6 696 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 TNPO3Q9Y5L0 923 aaKnown RBP28.88■■■□□ 2.21
CMTM4-202ENST00000394106 SHANK1Q9Y566 2161 aa28.88■■■□□ 2.21
CMTM4-202ENST00000394106 GNLYP22749 145 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 CERS1P27544 350 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 ZNF33BQ06732 778 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 PCDH1Q08174 1060 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 GTF2H2Q13888 395 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 PCBP2Q15366 365 aaKnown RBP eCLIP28.87■■■□□ 2.213e-12■■■■■ 52.8
CMTM4-202ENST00000394106 TEX35Q5T0J7 233 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 LGSNQ5TDP6 509 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 ABHD17BQ5VST6 288 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 GRHL2Q6ISB3 625 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 GTF2H2CQ6P1K8 395 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 PTGR2Q8N8N7 351 aaPredicted RBP28.87■■■□□ 2.21
CMTM4-202ENST00000394106 OR7G3Q8NG95 312 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 ZNF473Q8WTR7 871 aaKnown RBP28.87■■■□□ 2.21
CMTM4-202ENST00000394106 SERINC2Q96SA4 455 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 MS4A8Q9BY19 250 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 ACTR8Q9H981 624 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 CPAMD8Q8IZJ3 1885 aa28.87■■■□□ 2.21
CMTM4-202ENST00000394106 COL6A2P12110 1019 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 GCAP28676 217 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 MTTPP55157 894 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 RAB38P57729 211 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 DDX39BQ13838 428 aaKnown RBP28.86■■■□□ 2.21
CMTM4-202ENST00000394106 GOLGA7Q7Z5G4 137 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 ARMC2Q8NEN0 867 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 M1APQ8TC57 530 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 PHF21BQ96EK2 531 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 SLC29A3Q9BZD2 475 aa28.86■■■□□ 2.21
CMTM4-202ENST00000394106 NECTIN3Q9NQS3 549 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms