RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 RALYQ9UKM9 306 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 A0A0G2JN53 185 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 SOCS6O14544 535 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 B3GALT2O43825 422 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 DNAJB6O75190 326 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 SPAG7O75391 227 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 JRKO75564 520 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 MLYCDO95822 493 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 RNH1P13489 461 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 CCL11P51671 97 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 DNAJB13P59910 316 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 MINDY4Q4G0A6 757 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 GGTA1PQ4G0N0 100 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 BEND6Q5SZJ8 279 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 KHDRBS2Q5VWX1 349 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 KIRREL2Q6UWL6 708 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 CCNYL1Q8N7R7 359 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 MYRIPQ8NFW9 859 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 WDR20Q8TBZ3 569 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 METTL21AQ8WXB1 218 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 TBC1D20Q96BZ9 403 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 MTFMTQ96DP5 389 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 QRFPRQ96P65 431 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 SERINC2Q96SA4 455 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 TBCDQ9BTW9 1192 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 CENPHQ9H3R5 247 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 DMRT3Q9NQL9 472 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 STK38LQ9Y2H1 464 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 HS3ST3B1Q9Y662 390 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 IGSF10Q6WRI0 2623 aa17.94■□□□□ 0.46
PDLIM7-204ENST00000393546 MAGEB17A8MXT2 336 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 MKRN2OSH3BPM6 223 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 PSMD12O00232 456 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 FOXE1O00358 373 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 PPP6CO00743 305 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 ALOX12BO75342 701 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 SH3BGRLO75368 114 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 FHP07954 510 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 CYC1P08574 325 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 JAK1P23458 1154 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 MTTPP55157 894 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 RPS13P62277 151 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 IFT88Q13099 833 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 CHAF1BQ13112 559 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 KCNAB2Q13303 367 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 LY6DQ14210 128 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 AP5B1Q2VPB7 878 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 TUBB8Q3ZCM7 444 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 CFAP157Q5JU67 520 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 C10orf62Q5T681 223 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 FRG2Q64ET8 278 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 CPZQ66K79 652 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 FAAH2Q6GMR7 532 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 CA13Q8N1Q1 262 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 RNF175Q8N4F7 328 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 CLEC1AQ8NC01 280 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 ARMC2Q8NEN0 867 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 SLC39A7Q92504 469 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 RGMAQ96B86 450 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 FRG2BQ96QU4 278 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 VN1R1Q9GZP7 353 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 OR51B5Q9H339 312 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 ATP13A2Q9NQ11 1180 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 PRDM7Q9NQW5 492 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 OXSMQ9NWU1 459 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 TRPS1Q9UHF7 1281 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 TUBD1Q9UJT1 453 aa17.93■□□□□ 0.46
PDLIM7-204ENST00000393546 MED13Q9UHV7 2174 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 EIF4E1BA6NMX2 242 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 OR4F21O95013 312 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 ACPPP15309 386 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 NEK2P51955 445 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 RAP1GDS1P52306 607 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 NAGLUP54802 743 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 PKNOX1P55347 436 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 LCP2Q13094 533 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 RUNX2Q13950 521 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 SOWAHCQ53LP3 525 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 DCAF10Q5QP82 559 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 LETMD1Q6P1Q0 360 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 GPRIN3Q6ZVF9 776 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 UBE3DQ7Z6J8 389 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 SHISA5Q8N114 240 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 PLPP5Q8NEB5 264 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 OR11G2Q8NGC1 345 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 BBC3Q96PG8 261 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 ZNF382Q96SR6 550 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 RBCK1Q9BYM8 510 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 TRIM55Q9BYV6 548 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 ELOVL6Q9H5J4 265 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 FBXL4Q9UKA2 621 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 PPT2Q9UMR5 302 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 SNX6Q9UNH7 406 aa17.92■□□□□ 0.46
PDLIM7-204ENST00000393546 SCN2AQ99250 2005 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 A0A1B0GTL3 188 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 SAP18O00422 153 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 B4GALT2O60909 372 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 DNAJB5O75953 348 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 C8orf89P0DMQ9 161 aa17.91■□□□□ 0.46
PDLIM7-204ENST00000393546 ARFIP1P53367 373 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms