RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TRAPPC4Q9Y296 219 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PKP3Q9Y446 797 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KLK4Q9Y5K2 254 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 RLN1P04808 185 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 ALPIP09923 528 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 HAPLN1P10915 354 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 RAB4AP20338 218 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 RAB5CP51148 216 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 AFF1P51825 1210 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 C1QTNF8P60827 252 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 NPRL3Q12980 569 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SNTB1Q13884 538 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 FAM187BQ17R55 369 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM161BQ8NDZ6 487 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF419Q96HQ0 510 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 TEPSINQ96N21 525 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 FAM193BQ96PV7 902 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 OR2M2Q96R28 347 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 MEAF6Q9HAF1 191 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 KLK14Q9P0G3 267 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PRAMEF2O60811 474 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 CDK14O94921 469 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 FARS2O95363 451 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 AP2A1O95782 977 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 C1RP00736 705 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 MAPTP10636 758 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PRKAR2AP13861 404 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 HOXB3P14651 431 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 MASP1P48740 699 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 XKP51811 444 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PSPHP78330 225 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 KEAP1Q14145 624 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 ARHGAP15Q53QZ3 475 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PCID2Q5JVF3 399 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PRAMEF19Q5SWL8 479 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 CERCAMQ5T4B2 595 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 IDNKQ5T6J7 187 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 C22orf42Q6IC83 251 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SLC27A4Q6P1M0 643 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 CYS1Q717R9 158 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PAQR7Q86WK9 346 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 DTWD1Q8N5C7 304 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 MRPL48Q96GC5 212 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 MEGF10Q96KG7 1140 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 IFT27Q9BW83 186 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SARS2Q9NP81 518 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PRMT7Q9NVM4 692 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 OR6C2Q9NZP2 312 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 STUB1Q9UNE7 303 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 HACD1B0YJ81 288 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 AIPO00170 330 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 ADORA2BP29275 332 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PTPN6P29350 595 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 RFX2P48378 723 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 CREMQ03060 361 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 CAMK2GQ13555 558 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SEMA5AQ13591 1074 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM132DQ14C87 1099 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 EIF4HQ15056 248 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 LIPKQ5VXJ0 399 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 ETFRF1Q6IPR1 90 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SLC30A6Q6NXT4 461 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 IL27RAQ6UWB1 636 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 GLCCI1Q86VQ1 547 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 GHDCQ8N2G8 530 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 NLGN4YQ8NFZ3 816 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 OR10K1Q8NGX5 313 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 DTD1Q8TEA8 209 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SCARB1Q8WTV0 552 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 RNF170Q96K19 258 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 FAM126AQ9BYI3 521 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SRRQ9GZT4 340 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PORCNQ9H237 461 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PPP1R14DQ9NXH3 145 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 MS4A12Q9NXJ0 267 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 BABAM2Q9NXR7 383 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 TSR3Q9UJK0 312 aaKnown RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 SLC45A1Q9Y2W3 748 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PRG3Q9Y2Y8 225 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PTPRJQ12913 1337 aa7.36□□□□□ -1.23
VTI1A-201ENST00000393077 PQLC2LA1A4F0 135 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 HMX2A2RU54 273 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 FAM234BA2RU67 622 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 LRIT2A6NDA9 550 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 MFSD2BA6NFX1 497 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 SPATA31C2B4DYI2 1134 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 EEF1E1O43324 174 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 POP7O75817 140 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 HTR1AP08908 422 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 CSF3P09919 207 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 CXCL8P10145 99 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PCMT1P22061 227 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 MMP12P39900 470 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ETV6P41212 452 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 NUMBP49757 651 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF143P52747 638 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms