RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DNASE1L2Q92874 299 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 RHBDF1Q96CC6 855 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 ACPTQ9BZG2 426 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 RWDD3Q9Y3V2 267 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 DNAJC25-GNG10A0A024R161 153 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 CLDN24A6NM45 220 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 AKAP8O43823 692 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 POP4O95707 220 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 HLA-DPB1P04440 258 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 CDK1P06493 297 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 STARP49675 285 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 CDH11P55287 796 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 CBLBQ13191 982 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 MPPE1Q53F39 396 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 RNF44Q7L0R7 432 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 GGHQ92820 318 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 SLC35G5Q96KT7 338 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 MUSKO15146 869 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 JRKO75564 520 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 RGMBQ6NW40 437 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 SUSD1Q6UWL2 747 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 TOMM5Q8N4H5 51 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 KLHL36Q8N4N3 616 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 DENND6BQ8NEG7 585 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 SNAPC3Q92966 411 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 SCAMP4Q969E2 229 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 ELAC1Q9H777 363 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 ENAMQ9NRM1 1142 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
TRAPPC9-201ENST00000389328 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.39
TRAPPC9-201ENST00000389328 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 MTMR11A4FU01 709 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR1F1O43749 312 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CNMDO75829 334 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 IFNA7P01567 189 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CBSLP0DN79 551 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CBSP35520 551 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 HMGCLP35914 325 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 DGKGP49619 791 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 SMSP52788 366 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 KCNC4Q03721 635 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 DLEU7Q6UYE1 221 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 IQCHQ86VS3 1027 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ADAMTS16Q8TE57 1224 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 RIOK2Q9BVS4 552 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 HDHD5Q9BXW7 423 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 RANGRFQ9HD47 186 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 PLD2O14939 933 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CRYZL1O95825 349 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 HPGDP15428 266 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 GGT2P36268 569 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 DOC2AQ14183 400 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 PGBD5Q8N414 524 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF655Q8N720 491 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZSCAN5AQ9BUG6 496 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 NUDT7P0C024 238 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 STOMP27105 288 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 UQCRC1P31930 480 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF140P52738 457 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF763Q0D2J5 394 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CHMP1BQ7LBR1 199 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 FAM98AQ8NCA5 519 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR2AP1Q8NGE2 309 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ASB15Q8WXK1 588 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZBED6CLQ96FA7 236 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ERMAPQ96PL5 475 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 RNF167Q9H6Y7 350 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 PHF11Q9UIL8 331 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 FBXW2Q9UKT8 454 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 STUB1Q9UNE7 303 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 A0A1W2PRG6 482 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 RAB36O95755 333 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CCR4P51679 360 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC3A1Q07837 685 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 SYT6Q5T7P8 510 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 IER5LQ5T953 404 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 TXNDC8Q6A555 127 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 SHFQ7M4L6 423 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 VWA5B2Q8N398 1253 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 VMP1Q96GC9 406 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 LRR1Q96L50 414 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 MBOAT4Q96T53 435 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 NELL2Q99435 816 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 CLMPQ9H6B4 373 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 RNF121Q9H920 327 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 C3orf14Q9HBI5 128 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 INIPQ9NRY2 104 aa12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 IMP3Q9NV31 184 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-201ENST00000389328 TCRBV5S2A0A599 114 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 PTHP01270 115 aa12.63□□□□□ -0.39
TRAPPC9-201ENST00000389328 STATHP02808 62 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms