RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SNAI2O43623 268 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 KIF5CO60282 957 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ATP6AP2O75787 350 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 RECQL5O94762 991 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 STBD1O95210 358 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PRAMEF12O95522 483 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 GSRP00390 522 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CALCAP01258 141 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 IGKV1D-16P01601 117 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 MT-ND2P03891 347 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 DNTTP04053 509 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 HSPB1P04792 205 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 YES1P07947 543 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 RAB40ALP0C0E4 278 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 OR9G9P0C7N8 305 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SAGP10523 405 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 LAMP2P13473 410 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 HSD17B1P14061 328 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 GOT1P17174 413 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TRIM21P19474 475 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 FUT3P21217 361 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 AZGP1P25311 298 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CTNNA2P26232 953 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 MAPK4P31152 587 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 DUTP33316 252 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 HADHAP40939 763 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 GARSP41250 739 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SLC1A6P48664 564 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 LHX1P48742 406 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 EVCP57679 992 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PFN3P60673 137 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 POLR2LP62875 67 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 GSTO1P78417 241 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SETQ01105 290 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CREB5Q02930 508 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ILF2Q12905 390 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 RALGDSQ12967 914 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 G3BP1Q13283 466 aaKnown RBP eCLIP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ASAH1Q13510 395 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 EIF4EBP1Q13541 118 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 KRT32Q14532 448 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 IRF3Q14653 427 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 C16orf72Q14CZ0 275 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 HERPUD1Q15011 391 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PTGES3Q15185 160 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 NPTX1Q15818 432 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SNAPC1Q16533 368 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 IL17AQ16552 155 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PPP1R3AQ16821 1122 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 C17orf58Q2M2W7 97 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 LRRC37A5PQ49AS3 106 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 NHSL2Q5HYW2 709 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 KPRPQ5T749 579 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 C6orf163Q5TEZ5 329 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 KRT79Q5XKE5 535 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PRR27Q6MZM9 219 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ZSCAN25Q6NSZ9 544 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TTC27Q6P3X3 843 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 DHRS11Q6UWP2 260 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ABRAXAS1Q6UWZ7 409 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 C2orf66Q6UXQ4 117 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SCARA5Q6ZMJ2 495 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 MACC1Q6ZN28 852 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 NUFIP2Q7Z417 695 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TRMT11Q7Z4G4 463 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ABI3BPQ7Z7G0 1075 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 KBTBD6Q86V97 674 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF677Q86XU0 584 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CCDC60Q8IWA6 550 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CPXCR1Q8N123 301 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 GUF1Q8N442 669 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TTC39CQ8N584 583 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF781Q8N8C0 355 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SAMD12Q8N8I0 201 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 RASGEF1AQ8N9B8 481 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CCDC63Q8NA47 563 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF397Q8NF99 534 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 BEST4Q8NFU0 473 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 VN1R17PQ8TDU5 208 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PTPMT1Q8WUK0 201 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 UCMAQ8WVF2 138 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 LIPHQ8WWY8 451 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SEPT1Q8WYJ6 367 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 LPGAT1Q92604 370 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 MARC2Q969Z3 335 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PTERQ96BW5 349 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 MOB3AQ96BX8 217 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 RBM41Q96IZ5 413 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 C7orf26Q96N11 449 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 OR5M11Q96RB7 305 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SEC62Q99442 399 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF670Q9BS34 389 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ITPAQ9BY32 194 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TNMDQ9H2S6 317 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 VCXQ9H320 206 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ACTL8Q9H568 366 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 CDH20Q9HBT6 801 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 EIF2B3Q9NR50 452 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 NECAP2Q9NVZ3 263 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SAGE1Q9NXZ1 904 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms