RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 IGKV3D-11A0A0A0MRZ8 115 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 TCRBV16S1A1N1A0A5B0 115 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 URADA6NGE7 173 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 TGFBR3LH3BV60 316 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 CCDC188H7C350 402 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 TAPBPO15533 448 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 HNRNPRO43390 633 aaKnown RBP13.24□□□□□ -0.29
SHOX-202ENST00000381575 ERI3O43414 337 aaKnown RBP13.24□□□□□ -0.29
SHOX-202ENST00000381575 PRAMEF4O60810 478 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 SLC25A12O75746 678 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 MYO1DO94832 1006 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 SP1P08047 785 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 SERPINA6P08185 405 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 C1GALT1C1LP0DN25 315 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 RFC3P40938 356 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 PAFAH1B1P43034 410 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 SLC6A12P48065 614 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 ADORA2A-AS1P86434 159 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 CDKL1Q00532 357 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 RBPJQ06330 500 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 RUNX2Q13950 521 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 OR4D1Q15615 310 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 RNFT1Q5M7Z0 435 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 PRAMEF9Q5VWM5 478 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 ZNF227Q86WZ6 799 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 INTS1Q8N201 2190 aaKnown RBP13.24□□□□□ -0.29
SHOX-202ENST00000381575 FAM47BQ8NA70 645 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 TMEM178AQ8NBL3 297 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 NFAM1Q8NET5 270 aaPredicted RBP13.24□□□□□ -0.29
SHOX-202ENST00000381575 MAGED4Q96JG8 741 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 GPR137Q96N19 417 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 PRDM9Q9NQV7 894 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
SHOX-202ENST00000381575 WWOXQ9NZC7 414 aa13.24□□□□□ -0.29
SHOX-202ENST00000381575 TRBV11-1A0A0K0K1C0 115 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 ASPDHA6ND91 283 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 WISP3O95389 354 aaPredicted RBP13.23□□□□□ -0.29
SHOX-202ENST00000381575 CCDC166P0CW27 439 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 GNAZP19086 355 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 HSPA7P48741 367 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 PLA2G16P53816 162 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 SLC12A2P55011 1212 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 MLF1P58340 268 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 CDSNQ15517 529 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 TGFBIQ15582 683 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 SLC25A25Q6KCM7 469 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 TMIGD1Q6UXZ0 262 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 C3P1Q6ZMU1 363 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 CLNKQ7Z7G1 428 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 TICAM1Q8IUC6 712 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 SIAH3Q8IW03 269 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 MCEMP1Q8IX19 187 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 SNX31Q8N9S9 440 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 PYROXD1Q8WU10 500 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 GAL3ST3Q96A11 431 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 MS4A6EQ96DS6 147 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 DEFB126Q9BYW3 111 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 PCDHGB6Q9Y5F9 930 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 AKAP9Q99996 3911 aa13.23□□□□□ -0.29
SHOX-202ENST00000381575 ANKRD17O75179 2603 aaKnown RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 CLGNO14967 610 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 RAD51CO43502 376 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 NME2P1O60361 137 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 TBX6O95947 436 aaPredicted RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 NME2P22392 152 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 CERS1P27544 350 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 HTR1EP28566 365 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 HNMTP50135 292 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 STXBP1P61764 594 aaKnown RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 C2orf54Q08AI8 447 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 NIPAL1Q6NVV3 410 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 C16orf47Q6ZP98 133 aaPredicted RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 GPSM1Q86YR5 675 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 KLHDC8AQ8IYD2 350 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 SLC34A3Q8N130 599 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 APCDD1LQ8NCL9 501 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 ARMC2Q8NEN0 867 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 ANKRD7Q92527 254 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 FAR2Q96K12 515 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 CSF3RQ99062 836 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 DNAJC11Q9NVH1 559 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 NSMCE4AQ9NXX6 385 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 ZNF223Q9UK11 482 aaPredicted RBP13.22□□□□□ -0.29
SHOX-202ENST00000381575 FBXW2Q9UKT8 454 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 ASB1Q9Y576 335 aa13.22□□□□□ -0.29
SHOX-202ENST00000381575 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 LRIT2A6NDA9 550 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 ASNA1O43681 348 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 PRKNO60260 465 aaPredicted RBP13.21□□□□□ -0.29
SHOX-202ENST00000381575 SH3BGRLO75368 114 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 FAM155BO75949 473 aa13.21□□□□□ -0.29
SHOX-202ENST00000381575 ESRRAP11474 423 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms