RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CIB4A0PJX0 185 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 MANBAO00462 879 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ABLIM3O94929 683 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 CORO1AP31146 461 aaKnown RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 ARF5P84085 180 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 PPIGQ13427 754 aaKnown RBP eCLIP13.31□□□□□ -0.28
SDC1-202ENST00000381150 LEXMQ3ZCV2 418 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 C16orf62Q7Z3J2 963 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 GPR156Q8NFN8 814 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 PLD4Q96BZ4 506 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 FAM126AQ9BYI3 521 aaPredicted RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 ATG10Q9H0Y0 220 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 KCNH6Q9H252 994 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 NUDT4Q9NZJ9 180 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ZNF222Q9UK12 451 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 HOXA2O43364 376 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ALPIP09923 528 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 UBL4AP11441 157 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 RGS4P49798 205 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 EXOC3L2Q2M3D2 409 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ADGRF1Q5T601 910 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 FAM180BQ6P0A1 224 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 PAQR6Q6TCH4 344 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 CHST9Q7L1S5 443 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 C16orf59Q7L2K0 433 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 SCLYQ96I15 445 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ACPTQ9BZG2 426 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ING3Q9NXR8 418 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 FZD4Q9ULV1 537 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 PPT2Q9UMR5 302 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 LOC102723532A0A0G2JNH3 316 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 PLK4O00444 970 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 POU3F3P20264 500 aaPredicted RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 GPC1P35052 558 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 IL18Q14116 193 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 WSCD2Q2TBF2 565 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 RNASE12Q5GAN4 147 aaKnown RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 TMIGD1Q6UXZ0 262 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 ZFP41Q8N8Y5 198 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 TRMT61AQ96FX7 289 aaKnown RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 HRASLS5Q96KN8 279 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 BARHL1Q9BZE3 327 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 PPIL3Q9H2H8 161 aaKnown RBP13.31□□□□□ -0.28
SDC1-202ENST00000381150 PCDHGB3Q9Y5G1 929 aa13.31□□□□□ -0.28
SDC1-202ENST00000381150 C2orf78A6NCI8 922 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 B4DXG7 233 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ANKRD66B4E2M5 251 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 PLD2O14939 933 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 GGT2P36268 569 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 SLC9A3P48764 834 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 MAN2A2P49641 1150 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 PRIM2P49643 509 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 CDC42P60953 191 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 HSPA14Q0VDF9 509 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 FAM205BPQ63HN1 556 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 BBS7Q8IWZ6 715 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ACAT2Q9BWD1 397 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 STOML2Q9UJZ1 356 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 CMAHPQ9Y471 501 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 A0A1B0GVC2 190 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 A0A1B0GVM2 712 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 A6NIN4 97 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 KLK8O60259 260 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 CXCL10P02778 98 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 GBAP04062 536 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 KIR2DL3P43628 341 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 PTPN5P54829 565 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 POU4F3Q15319 338 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ZNF79Q15937 498 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 UGT8Q16880 541 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ASB18Q6ZVZ8 466 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 TMEM150AQ86TG1 271 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 GRAMD2AQ8IUY3 354 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 VWA5B2Q8N398 1253 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ZNF461Q8TAF7 563 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 DHRS9Q9BPW9 319 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 WACQ9BTA9 647 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 TM6SF2Q9BZW4 377 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 EVA1BQ9NVM1 165 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 SLC23A1Q9UHI7 598 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 YARS2Q9Y2Z4 477 aaKnown RBP13.3□□□□□ -0.28
SDC1-202ENST00000381150 RAI2Q9Y5P3 530 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 DNAH14Q0VDD8 3507 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 PLXNA4Q9HCM2 1894 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.3□□□□□ -0.28
SDC1-202ENST00000381150 SNTNA6NMZ2 147 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 CDK2AP1O14519 115 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 WNT9AO14904 365 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 NUPL2O15504 423 aaKnown RBP13.3□□□□□ -0.28
SDC1-202ENST00000381150 GREM1O60565 184 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 TPST2O60704 377 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 RHOCP08134 193 aa13.3□□□□□ -0.28
SDC1-202ENST00000381150 SRP54P61011 504 aaKnown RBP13.3□□□□□ -0.28
SDC1-202ENST00000381150 ZNF177Q13360 481 aaPredicted RBP13.3□□□□□ -0.28
SDC1-202ENST00000381150 FBLIM1Q8WUP2 373 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms