RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 CHPT1Q8WUD6 406 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 FCAMRQ8WWV6 532 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 OTUB2Q96DC9 234 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 L3HYPDHQ96EM0 354 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 IMP4Q96G21 291 aaKnown RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 ABCG5Q9H222 651 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 GPN2Q9H9Y4 310 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 GKN1Q9NS71 199 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 ANKMY1Q9P2S6 941 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 HCN4Q9Y3Q4 1203 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 PCDHGB6Q9Y5F9 930 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 TEX28O15482 410 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 HSD17B1P14061 328 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 DRD5P21918 477 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 AHCYP23526 432 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 GNALP38405 381 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 ARCN1P48444 511 aaKnown RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 PON2Q15165 354 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 RUNDC3AQ59EK9 446 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 HSDL2Q6YN16 418 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 MARCH9Q86YJ5 346 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 CHERPQ8IWX8 916 aaKnown RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 IQCF2Q8IXL9 164 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 CLECL1Q8IZS7 167 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 PAPD5Q8NDF8 572 aaKnown RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 SRFBP1Q8NEF9 429 aaKnown RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 ACVR1CQ8NER5 493 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 OR9Q2Q8NGE9 314 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 GRHL3Q8TE85 626 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 ACDQ96AP0 544 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 SLC35G5Q96KT7 338 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF382Q96SR6 550 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 PPIL3Q9H2H8 161 aaKnown RBP4.05□□□□□ -1.76
BRCA2-201ENST00000380152 SMOC2Q9H3U7 446 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 MAGIXQ9H6Y5 334 aa4.05□□□□□ -1.76
BRCA2-201ENST00000380152 KANTRA0A1W2PQU2 76 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 GNB5O14775 395 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 NUPL2O15504 423 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 BCAS1O75363 584 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 RPP14O95059 124 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 RASGRP1O95267 797 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 STEAP4Q687X5 459 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF367Q7RTV3 350 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 MMAAQ8IVH4 418 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 FAM83FQ8NEG4 500 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF548Q8NEK5 533 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 RNF31Q96EP0 1072 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 HYLS1Q96M11 299 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 PAAF1Q9BRP4 392 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 KCNH6Q9H252 994 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 GSTO2Q9H4Y5 243 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 TMEM27Q9HBJ8 222 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 TRIM36Q9NQ86 728 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZCCHC3Q9NUD5 404 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 NLGN3Q9NZ94 848 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 RBM7Q9Y580 266 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZCWPW2A0A1B0GU75 182 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 LRRC72A6NJI9 287 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 EEF1E1O43324 174 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 JRKO75564 520 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ALPLP05186 524 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ALPPP05187 535 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 CHMP24386 653 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 CDKN1CP49918 316 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ARHGDIBP52566 201 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 E2F1Q01094 437 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 SLBPQ14493 270 aaKnown RBP eCLIP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 SPCS2Q15005 226 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 GARNL3Q5VVW2 1013 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 PPP2R2DQ66LE6 453 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 PIAS4Q8N2W9 510 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF557Q8N988 423 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 B3GNT7Q8NFL0 401 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 DNAJA4Q8WW22 397 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 RAB8BQ92930 207 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 NXPE2Q96DL1 559 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZSWIM3Q96MP5 696 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 CST11Q9H112 138 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 HMX1Q9NP08 348 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 FAM120CQ9NX05 1096 aaKnown RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 IL37Q9NZH6 218 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 PLEKHA6Q9Y2H5 1048 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 COLEC10Q9Y6Z7 277 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 EDIL3O43854 480 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 MITFO75030 526 aaPredicted RBP4.04□□□□□ -1.76
BRCA2-201ENST00000380152 EOMESO95936 686 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 HPRP00739 348 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 AMD1P17707 334 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 PROZP22891 400 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 EDNRAP25101 427 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 MAP2K3P46734 347 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 NRIP1P48552 1158 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 PPP3R1P63098 170 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 MC1RQ01726 317 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 AGMOQ6ZNB7 445 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 CPA6Q8N4T0 437 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 ZFP41Q8N8Y5 198 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 KDM1BQ8NB78 822 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 RFT1Q96AA3 541 aa4.04□□□□□ -1.76
BRCA2-201ENST00000380152 LRR1Q96L50 414 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms