RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SPNS1Q9H2V7 528 aa20.61■□□□□ 0.89
TRIM54-202ENST00000380075 RHBGQ9H310 441 aa20.61■□□□□ 0.89
TRIM54-202ENST00000380075 PADI2Q9Y2J8 665 aa20.61■□□□□ 0.89
TRIM54-202ENST00000380075 NOL3O60936 208 aaKnown RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 JRKO75564 520 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 DNAJB5O75953 348 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 CHRNB1P11230 501 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 DDX5P17844 614 aaKnown RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 EFNA1P20827 205 aaPredicted RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 DRD3P35462 400 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 SEC13P55735 322 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 HBA1P69905 142 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 PPP1R8Q12972 351 aaKnown RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 ENPP2Q13822 863 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 EGFLAMQ63HQ2 1017 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 VTCN1Q7Z7D3 282 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 OR13F1Q8NGS4 319 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 WDR48Q8TAF3 677 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 AIF1LQ9BQI0 150 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 DOHHQ9BU89 302 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 RSPH9Q9H1X1 276 aaPredicted RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 TRIT1Q9H3H1 467 aaKnown RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 TMEM38AQ9H6F2 299 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 HCN2Q9UL51 889 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 SAMHD1Q9Y3Z3 626 aaKnown RBP20.6■□□□□ 0.89
TRIM54-202ENST00000380075 PCM1Q15154 2024 aa20.6■□□□□ 0.89
TRIM54-202ENST00000380075 IGLON5A6NGN9 336 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 MYO1GB0I1T2 1018 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 hCG_2039718K7EN88 272 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 ADH1BP00325 375 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TAS2R50P59544 299 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 WSCD2Q2TBF2 565 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.59■□□□□ 0.89
TRIM54-202ENST00000380075 GCNT6Q5T4J0 391 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 AGBL4Q5VU57 503 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TRIM40Q6P9F5 258 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 SLC9B2Q86UD5 537 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 NAGSQ8N159 534 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 NELL2Q99435 816 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 EPYCQ99645 322 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 SLC35A5Q9BS91 424 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TEX101Q9BY14 249 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 NT5DC2Q9H857 520 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 LMAN1LQ9HAT1 526 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 ZDHHC4Q9NPG8 344 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 WASH6PQ9NQA3 447 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 SPASTQ9UBP0 616 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 EBF1Q9UH73 591 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 ACSL5Q9ULC5 683 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 STON1Q9Y6Q2 735 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TNFRSF21O75509 655 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 C6orf47O95873 294 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 NTRK1P04629 796 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 KLK1P06870 262 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 IL7RP16871 459 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TNFRSF4P43489 277 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 MVDP53602 400 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 KCNJ10P78508 379 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 MEF2AQ02078 507 aaPredicted RBP20.59■□□□□ 0.89
TRIM54-202ENST00000380075 C16orf72Q14CZ0 275 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 CST6Q15828 149 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 NEDD8Q15843 81 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 MEP1AQ16819 746 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 ANKRD34AQ69YU3 496 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 DHRS4L2Q6PKH6 230 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 CEP68Q76N32 757 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 CYP4Z1Q86W10 505 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 OR4K1Q8NGD4 311 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 SMPDL3AQ92484 453 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 C7orf34Q96L11 122 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 IL17FQ96PD4 163 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TAS2R9Q9NYW1 312 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 SLC23A2Q9UGH3 650 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 CDC14AQ9UNH5 594 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 ICKQ9UPZ9 632 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TDRKHQ9Y2W6 561 aaKnown RBP20.59■□□□□ 0.89
TRIM54-202ENST00000380075 SIT1Q9Y3P8 196 aa20.59■□□□□ 0.89
TRIM54-202ENST00000380075 PCYT1BQ9Y5K3 369 aaPredicted RBP20.59■□□□□ 0.89
TRIM54-202ENST00000380075 TRIM64BA6NI03 449 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 SEC14L2O76054 403 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 KRT75O95678 551 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 C9P02748 559 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 NUDT7P0C024 238 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 C5AR1P21730 350 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 CRATP43155 626 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 DAPP51397 102 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 TMBIM6P55061 237 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 CTU2Q2VPK5 515 aaKnown RBP20.58■□□□□ 0.89
TRIM54-202ENST00000380075 VN1R5Q7Z5H4 357 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 SLC30A8Q8IWU4 369 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 RAB42Q8N4Z0 105 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 ABHD11Q8NFV4 315 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 PRKAB1Q9Y478 270 aa20.58■□□□□ 0.89
TRIM54-202ENST00000380075 ANKDD1BA6NHY2 528 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 M0QX08 132 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 TBX19O60806 448 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 KLHL18O94889 574 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 PCDH8O95206 1070 aa20.57■□□□□ 0.88
TRIM54-202ENST00000380075 DCNP07585 359 aaKnown RBP20.57■□□□□ 0.88
TRIM54-202ENST00000380075 SLC35G4P0C7Q5 338 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms