RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CYP4Z1Q86W10 505 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CCDC117Q8IWD4 279 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 B3GALNT2Q8NCR0 500 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 OR6B3Q8NGW1 331 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF675Q8TD23 568 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 DNASE1L2Q92874 299 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PAWRQ96IZ0 340 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 C3orf30Q96M34 536 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF436Q9C0F3 470 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 RIBC2Q9H4K1 309 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ANKRD19PQ9H560 264 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 RASSF1Q9NS23 344 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PTTG3PQ9NZH4 202 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 NDRG2Q9UN36 371 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ASB4Q9Y574 426 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 KLK4Q9Y5K2 254 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 FAM240BA0A1B0GVZ2 78 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ASPDHA6ND91 283 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 AIPO00170 330 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 GTPBP1O00178 669 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 GNGT2O14610 69 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SEC22BO75396 215 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CREG1O75629 220 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 S100A8P05109 93 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ITGB1P05556 798 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SPP1P10451 314 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 NDUFB7P17568 137 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SPAM1P38567 509 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CSRP3P50461 194 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ATP12AP54707 1039 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ACTR1AP61163 376 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 OSTNP61366 133 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 KEAP1Q14145 624 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SEC23BQ15437 767 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PFKFB4Q16877 469 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 NADSYN1Q6IA69 706 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CCDC71Q8IV32 467 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MCATQ8IVS2 390 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 TMEM192Q8IY95 271 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ENTHD1Q8IYW4 607 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 KRT78Q8N1N4 520 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 THEM5Q8N1Q8 247 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 C12orf45Q8N5I9 185 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 FBXO30Q8TB52 745 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 DNAJB3Q8WWF6 145 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 OSMRQ99650 979 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MAP3K3Q99759 626 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 GLOD4Q9HC38 313 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 EMC7Q9NPA0 242 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SAGE1Q9NXZ1 904 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SLAMF8Q9P0V8 285 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ASH2LQ9UBL3 628 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 GIMAP2Q9UG22 337 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CPA4Q9UI42 421 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF222Q9UK12 451 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CMAHPQ9Y471 501 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 LOC102723532A0A0G2JNH3 316 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 INMT-MINDY4F8WBC2 141 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 M0QZQ0 153 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 M0R233 179 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 HOXA2O43364 376 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 LTA4HP09960 611 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 RD3LP0DJH9 198 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MAPK1P28482 360 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 RFC3P40938 356 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SLC19A1P41440 591 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MAN2A2P49641 1150 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 BCAR1P56945 870 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PAFAH1B3Q15102 231 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 OR2B11Q5JQS5 317 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 FAM74A1Q5RGS3 127 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 TMEM107Q6UX40 140 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 EIF3MQ7L2H7 374 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PIWIL4Q7Z3Z4 852 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 TRMT11Q7Z4G4 463 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MILR1Q7Z6M3 343 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CHPFQ8IZ52 775 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CENPLQ8N0S6 344 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PGBD3Q8N328 593 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 LRRC17Q8N6Y2 441 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 OR5K1Q8NHB7 308 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 WDR20Q8TBZ3 569 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 APH1BQ8WW43 257 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MRPS24Q96EL2 167 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SMARCD1Q96GM5 515 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 FUBP3Q96I24 572 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SLC38A3Q99624 504 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SARGQ9BW04 601 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 R3HDMLQ9H3Y0 253 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 EVA1AQ9H8M9 152 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CYTH4Q9UIA0 394 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 GPR160Q9UJ42 338 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 MAGEL2Q9UJ55 1249 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SLC6A5Q9Y345 797 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ORC6Q9Y5N6 252 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF638Q14966 1978 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms