RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 PROX1Q92786 737 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 VPS33AQ96AX1 596 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 PPP1R14BQ96C90 147 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 FAM120BQ96EK7 910 aaKnown RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 GATA5Q9BWX5 397 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 DGCR6LQ9BY27 220 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 Q9N2J8 555 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MYRFQ9Y2G1 1151 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MYH9P35579 1960 aaKnown RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 IGHV1OR15-9A0A0B4J2B8 117 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 A0A1W2PPW3 197 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 HTR3EA5X5Y0 456 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 FIGNL2A6NMB9 653 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 STX16-NPEPL1H3BU86 382 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 SCDO00767 359 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 KLF11O14901 512 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CBFA2T3O75081 653 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 OXSR1O95747 527 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 IL2RAP01589 272 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 LTA4HP09960 611 aaKnown RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 C8orf89P0DMQ9 161 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CHRNB1P11230 501 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 EPHA8P29322 1005 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MAD2L1Q13257 205 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 RGS21Q2M5E4 152 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 NIPAL1Q6NVV3 410 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 C1orf94Q6P1W5 598 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MCATQ8IVS2 390 aaKnown RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF687Q8N1G0 1237 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 NXPE1Q8N323 547 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 TCAIMQ8N3R3 496 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF548Q8NEK5 533 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 TSSK3Q96PN8 268 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 COQ7Q99807 217 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 TRIM15Q9C019 465 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CD93Q9NPY3 652 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 OLAHQ9NV23 265 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC167Q9P0B6 97 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 XPR1Q9UBH6 696 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 GPC6Q9Y625 555 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 A0A0J9YYE9 177 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 PRSS44E7EML9 344 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 K7EPI3 171 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 AP3D1O14617 1153 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 FAM189A1O60320 539 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CLIC3O95833 236 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 OTCP00480 354 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 TRBC1P01850 177 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CRYABP02511 175 aaKnown RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 C8GP07360 202 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ALOX5P09917 674 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MSL3P1P0C860 447 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ADSLP30566 484 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 YAP1P46937 504 aaKnown RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 TPTEP56180 551 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ATP6V0D1P61421 351 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MEF2AQ02078 507 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 DPYSL2Q16555 572 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 SMU1Q2TAY7 513 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 C4orf17Q53FE4 359 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 MTX3Q5HYI7 312 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 KHDC1LQ5JSQ8 128 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 GTF2IRD2BQ6EKJ0 949 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 GALNT18Q6P9A2 607 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 GTF2IRD2Q86UP8 949 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 OR8K5Q8NH50 307 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ACMSDQ8TDX5 336 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 HTRA1Q92743 480 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ESAMQ96AP7 390 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 PTERQ96BW5 349 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC74BQ96LY2 380 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 PSKH2Q96QS6 385 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC106Q9BWC9 280 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 NEK6Q9HC98 313 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 SCHIP1Q9P0W5 487 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 BOKQ9UMX3 212 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-202ENST00000379446 ACTL7AQ9Y615 435 aa6.29□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC162PA2VCL2 907 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NPIPA2E9PIF3 369 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NPIPA3F8WFD2 350 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PSMD11O00231 422 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NIPSNAP2O75323 286 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 RPL3P39023 403 aaKnown RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 CCR5P51681 352 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 NUBP1P53384 320 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 OLR1P78380 273 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 LY6DQ14210 128 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 HEPACAMQ14CZ8 416 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 ARL13AQ5H913 290 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 TMEM201Q5SNT2 666 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 OTUD3Q5T2D3 398 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 TMEM26Q6ZUK4 368 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 OFCC1Q8IZS5 231 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 FBXW8Q8N3Y1 598 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 PCYOX1LQ8NBM8 494 aa6.28□□□□□ -1.4
NEDD9-202ENST00000379446 DENND6BQ8NEG7 585 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms