RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 WASHC1A8K0Z3 465 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 hCG_2039718K7EN88 272 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 FPGTO14772 594 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 NUDT7P0C024 238 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 LAMP2P13473 410 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 EDN3P14138 238 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PLA2G16P53816 162 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 AP1S2P56377 157 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PWP1Q13610 501 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PRMT9Q6P2P2 845 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 WASH2PQ6VEQ5 465 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 HMGN2P46Q86SG4 172 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 CSGALNACT1Q8TDX6 532 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 TMIGD2Q96BF3 282 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ITCHQ96J02 903 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 CCDC138Q96M89 665 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 COQ10AQ96MF6 247 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 Q9H521 79 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 SLC39A1Q9NY26 324 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PDP2Q9P2J9 529 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 SLC27A6Q9Y2P4 619 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 C2orf16Q68DN1 1984 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 TCRBV3S1A0A5B6 114 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 SLC5A10A0PJK1 596 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 PPM1DO15297 605 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 SERPINA1P01009 418 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ALPPL2P10696 532 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 SELLP14151 372 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 JAK1P23458 1154 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 SLC6A12P48065 614 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CHN2P52757 468 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 MAD2L1Q13257 205 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ITPRIPL2Q3MIP1 535 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 SPESP1Q6UW49 350 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 NUP54Q7Z3B4 507 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 EPHX4Q8IUS5 362 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ADGRG5Q8IZF4 528 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 DEFB119Q8N690 84 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 WDR48Q8TAF3 677 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CIDECQ96AQ7 238 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-201ENST00000379433 WDR26Q9H7D7 661 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CBY1Q9Y3M2 126 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CKAP5Q14008 2032 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 MYO1DO94832 1006 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 JUPP14923 745 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 AMD1P17707 334 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 TNFRSF1BP20333 461 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 HTR2BP41595 481 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 TAS2R38P59533 333 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CDK3Q00526 305 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CHRNB3Q05901 458 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 KIAA0040Q15053 153 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 MZT2BQ6NZ67 158 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 TBPL2Q6SJ96 375 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 TMPRSS9Q7Z410 1059 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ZBTB46Q86UZ6 589 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF619Q8N2I2 560 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 PIK3C3Q8NEB9 887 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 USP7Q93009 1102 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF583Q96ND8 569 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 VPS35Q96QK1 796 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 MENTQ9BUN1 341 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 CARS2Q9HA77 564 aaKnown RBP10.37□□□□□ -0.75
NEDD9-201ENST00000379433 SMURF2Q9HAU4 748 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 GDE1Q9NZC3 331 aa10.37□□□□□ -0.75
NEDD9-201ENST00000379433 ARHGEF17Q96PE2 2063 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-201ENST00000379433 J3KRW8 73 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 PSMD11O00231 422 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 SSX5O60225 188 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 NME6O75414 186 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 KLF8O95600 359 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 SNAP29O95721 258 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 SLC35G4P0C7Q5 338 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 CYP4B1P13584 511 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 NPPBP16860 134 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF26P17031 533 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 EEF1B2P24534 225 aaKnown RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 AK4P27144 223 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 CRATP43155 626 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 TAP2Q03519 686 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 PIP5KL1Q5T9C9 394 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 PNCKQ6P2M8 343 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 TRIM46Q7Z4K8 759 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 KIAA0907Q7Z7F0 614 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 MSRB3Q8IXL7 192 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 ADCY4Q8NFM4 1077 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 ATL1Q8WXF7 558 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 RNF31Q96EP0 1072 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 LRIG1Q96JA1 1093 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 CCDC88CQ9P219 2028 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 ABCD2Q9UBJ2 740 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-201ENST00000379433 ELOVL7A1L3X0 281 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 SERTM1A2A2V5 107 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 YY2O15391 372 aa10.36□□□□□ -0.75
NEDD9-201ENST00000379433 PSIP1O75475 530 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms