RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NCLNQ969V3 563 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 LINGO1Q96FE5 620 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 SNF8Q96H20 258 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 HIST1H2AHQ96KK5 128 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 HIST1H2AJQ99878 128 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 H2AFJQ9BTM1 129 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 SLC6A16Q9GZN6 736 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 LIME1Q9H400 295 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 GSX1Q9H4S2 264 aaPredicted RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 IARS2Q9NSE4 1012 aaKnown RBP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 ARL15Q9NXU5 204 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 ZFATQ9P243 1243 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 COMMD10Q9Y6G5 202 aa16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 NIPBLQ6KC79 2804 aaeCLIP16.57■□□□□ 0.24
PDLIM4-202ENST00000379018 IGKV3D-11A0A0A0MRZ8 115 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 CTAGE15A4D2H0 777 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 SDR42E2A6NKP2 422 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 A8MVJ9 347 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 ACOT7O00154 380 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 CDK2AP1O14519 115 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 GUCA1CO95843 209 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 PPP2R1BP30154 601 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 FOLH1Q04609 750 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 SP140Q13342 867 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 GXYLT1Q4G148 440 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 HSP90AA5PQ58FG0 334 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 TOR1AIP1Q5JTV8 583 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 LRRC8EQ6NSJ5 796 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 UGT3A1Q6NUS8 523 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 PAQR3Q6TCH7 311 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 IL20RBQ6UXL0 311 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 CTAGE6Q86UF2 777 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 APCDD1LQ8NCL9 501 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 PSD4Q8NDX1 1056 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 OR4K3Q96R72 315 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 CCDC77Q9BR77 488 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 POLDIP3Q9BY77 421 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 KLHL31Q9H511 634 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 HPF1Q9NWY4 346 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 LIPGQ9Y5X9 500 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 EML6Q6ZMW3 1958 aa16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 ANKHD1Q8IWZ3 2542 aaKnown RBP16.56■□□□□ 0.24
PDLIM4-202ENST00000379018 A0A0G2JN53 185 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 EIF3FO00303 357 aaPredicted RBP16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 KLK8O60259 260 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 PRKNO60260 465 aaPredicted RBP16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 DRD2P14416 443 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 ACVR2AP27037 513 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 CSHL1Q14406 222 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 RBBP5Q15291 538 aaKnown RBP16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 HECTD2Q5U5R9 776 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 NIPAL1Q6NVV3 410 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 WDR53Q7Z5U6 358 aaPredicted RBP16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 CA13Q8N1Q1 262 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 ABHD11Q8NFV4 315 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 NT5CQ8TCD5 201 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 CALML6Q8TD86 181 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 ASB15Q8WXK1 588 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 VMP1Q96GC9 406 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 FOXC2Q99958 501 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 GPATCH1Q9BRR8 931 aaKnown RBP16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 PLSCR2Q9NRY7 297 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 ALKBH4Q9NXW9 302 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 ZFP69BQ9UJL9 534 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 ZNF223Q9UK11 482 aaPredicted RBP16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 PLEKHA6Q9Y2H5 1048 aa16.55■□□□□ 0.24
PDLIM4-202ENST00000379018 MYOCOSA0A1B0GUC4 107 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 C4orf51C9J302 202 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 OR2J2O76002 312 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 KRT14P02533 472 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 SAT1P21673 171 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 SCTRP47872 440 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 PGGT1BP53609 377 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 TIAL1Q01085 375 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 RBM20Q5T481 1227 aaKnown RBP16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 DUPD1Q68J44 220 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 CLNKQ7Z7G1 428 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 TMPRSS11BQ86T26 416 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 SPC24Q8NBT2 197 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 OR2M7Q8NG81 312 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 MAIP1Q8WWC4 291 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 SLC5A11Q8WWX8 675 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 NEIL2Q969S2 332 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 SERPINB12Q96P63 405 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 FAM167BQ9BTA0 163 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 TTTY12Q9BZ98 90 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 TAS2R13Q9NYV9 303 aa16.54■□□□□ 0.24
PDLIM4-202ENST00000379018 URADA6NGE7 173 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 FIGNL2A6NMB9 653 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 WWP2O00308 870 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 OR6B1O95007 311 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 SOX3P41225 446 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 ZFP36L2P47974 494 aaKnown RBP16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 CDKN2DP55273 166 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 DLX5P56178 289 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 BTN3A2P78410 334 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 FOXD4Q12950 439 aaPredicted RBP16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 ZNF750Q32MQ0 723 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms