RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 KDM4FA0A1W2PPD8 638 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 OR14I1A6ND48 311 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 DUXAA6NLW8 204 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 AGRPO00253 132 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 LAMP2P13473 410 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 RPL34P49207 117 aaKnown RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 NCBP2P52298 156 aaKnown RBP eCLIP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 MADCAM1Q13477 382 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CHMP1BQ7LBR1 199 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 KRT77Q7Z794 578 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PROKR1Q8TCW9 393 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 OR5P2Q8WZ92 322 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SLCO4A1Q96BD0 722 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 TESCQ96BS2 214 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PDLIM5Q96HC4 596 aaKnown RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 NTMT1Q9BV86 223 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF717Q9BY31 904 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SLC7A5P2Q9GIP4 190 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 GPRC5BQ9NZH0 403 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF879B4DU55 563 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ARL6IP5O75915 188 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 KLHL18O94889 574 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SNAI1O95863 264 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 KLK1P06870 262 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 NR4A2P43354 598 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 OXA1LQ15070 435 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 TSC22D1Q15714 1073 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ATAT1Q5SQI0 421 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PRAMEF14Q5SWL7 426 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PRAMEF13Q5VWM6 474 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 KIAA1161Q6NSJ0 714 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 GDPD4Q6W3E5 623 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 GET4Q7L5D6 327 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PLCZ1Q86YW0 608 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 TMC8Q8IU68 726 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SLC7A5P1Q8MH63 180 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 OR56A1Q8NGH5 318 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF3P17036 446 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PPM1AP35813 382 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 STXBP1P61764 594 aaKnown RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 GPR17Q13304 367 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 LIPKQ5VXJ0 399 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 DEFB128Q7Z7B8 93 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF548Q8NEK5 533 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 OR52N2Q8NGI0 321 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SLC5A11Q8WWX8 675 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 METTL2AQ96IZ6 378 aaKnown RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ART5Q96L15 291 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 FEVQ99581 238 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 MYOCQ99972 504 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CSNK1G1Q9HCP0 422 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 EQTNQ9NQ60 294 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 STRCQ7RTU9 1775 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 LRRN3E7EW58 273 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 TPST2O60704 377 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 LATS1O95835 1130 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 HRH2P25021 359 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 BDKRB1P46663 353 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ATP13A5Q4VNC0 1218 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ALKAL1Q6UXT8 129 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CCDC107Q8WV48 283 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SLC9A6Q92581 669 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 RERGQ96A58 199 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CHFRQ96EP1 664 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 GON7Q9BXV9 100 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 MIR1-1HGQ9H1L0 117 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 LRRN3Q9H3W5 708 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 PCDHGB2Q9Y5G2 931 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 FKBP7Q9Y680 259 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 M0QZQ0 153 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 PLD2O14939 933 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 OR1F1O43749 312 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 RGS9O75916 674 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CRYZL1O95825 349 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF24P17028 368 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CMPK1P30085 196 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 NRIP1P48552 1158 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CASP9P55211 416 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SYT6Q5T7P8 510 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 AGMOQ6ZNB7 445 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CBLL1Q75N03 491 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 DEFB132Q7Z7B7 95 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 GPR78Q96P69 363 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 INPP5KQ9BT40 448 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF385DQ9H6B1 395 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 BRF2Q9HAW0 419 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 DUS2Q9NX74 493 aaKnown RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CKLFQ9UBR5 152 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 PHIPQ8WWQ0 1821 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 DRGXA6NNA5 263 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SOX14O95416 240 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TGFB1P01137 390 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CSF2P04141 144 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 MNDAP41218 407 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 OR1E2P47887 323 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TAS2R50P59544 299 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SELENOWP63302 87 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SEMA3BQ13214 749 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 IRF5Q13568 498 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms