RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CXorf49A8MYA2 514 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 C4orf51C9J302 202 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 NPIPA5E9PKD4 350 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 SLC25A12O75746 678 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 PIAS1O75925 651 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 C1QAP02745 245 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 NCF1P14598 390 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 TPP2P29144 1249 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 BTN3A2P78410 334 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 SLBPQ14493 270 aaKnown RBP eCLIP19.7■□□□□ 0.74
VSX1-201ENST00000376707 NAA30Q147X3 362 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 MAPKAPK3Q16644 382 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 C18orf21Q32NC0 220 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 TMIGD1Q6UXZ0 262 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 SLCO4C1Q6ZQN7 724 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.7■□□□□ 0.74
VSX1-201ENST00000376707 KLHDC8AQ8IYD2 350 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 C17orf53Q8N3J3 647 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 ZNF808Q8N4W9 903 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 TTLQ8NG68 377 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 CCT6BQ92526 530 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 CDKL2Q92772 493 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 GAL3ST3Q96A11 431 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 RHBDF1Q96CC6 855 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 CPNE1Q99829 537 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 DEFB126Q9BYW3 111 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 UNKQ9C0B0 810 aaKnown RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 DERL2Q9GZP9 239 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 NECTIN3Q9NQS3 549 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 TXNDC16Q9P2K2 825 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 NPIPA1Q9UND3 350 aa19.7■□□□□ 0.74
VSX1-201ENST00000376707 MTO1Q9Y2Z2 717 aaKnown RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 KLF2Q9Y5W3 355 aaPredicted RBP19.7■□□□□ 0.74
VSX1-201ENST00000376707 CRYBG3Q68DQ2 2970 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 FAM159BA6NKW6 160 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 GSTA2P09210 222 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 ESRRAP11474 423 aaPredicted RBP19.69■□□□□ 0.74
VSX1-201ENST00000376707 SLC6A12P48065 614 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 CYB561P49447 251 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 MLF1P58340 268 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 CAV1Q03135 178 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 TGFBIQ15582 683 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 C3AR1Q16581 482 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 ZNF468Q5VIY5 522 aaPredicted RBP19.69■□□□□ 0.74
VSX1-201ENST00000376707 KRT78Q8N1N4 520 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 NFAM1Q8NET5 270 aaPredicted RBP19.69■□□□□ 0.74
VSX1-201ENST00000376707 TSPAN17Q96FV3 270 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 RBBP8Q99708 897 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 CAPS2Q9BXY5 557 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 AICDAQ9GZX7 198 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 RUBCNLQ9H714 662 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 TINAGQ9UJW2 476 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 UTP11Q9Y3A2 253 aaKnown RBP19.69■□□□□ 0.74
VSX1-201ENST00000376707 MMACHCQ9Y4U1 282 aa19.69■□□□□ 0.74
VSX1-201ENST00000376707 A0A088AWK7 358 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 A0A0G2JN53 185 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 FCHO1O14526 889 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 ERI3O43414 337 aaKnown RBP19.68■□□□□ 0.74
VSX1-201ENST00000376707 ZNF10P21506 573 aaPredicted RBP19.68■□□□□ 0.74
VSX1-201ENST00000376707 GSTM2P28161 218 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 SYT10Q6XYQ8 523 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 C3orf62Q6ZUJ4 267 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 SRRM1Q8IYB3 904 aaKnown RBP19.68■□□□□ 0.74
VSX1-201ENST00000376707 TCAIMQ8N3R3 496 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 SPATA6LQ8N4H0 392 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 TMEM125Q96AQ2 219 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 GPR22Q99680 433 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 RAB17Q9H0T7 212 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 CNOT10Q9H9A5 744 aaKnown RBP19.68■□□□□ 0.74
VSX1-201ENST00000376707 CAB39LQ9H9S4 337 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 WWOXQ9NZC7 414 aa19.68■□□□□ 0.74
VSX1-201ENST00000376707 NME2P1O60361 137 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 MYO1DO94832 1006 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 NME2P22392 152 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 GRNP28799 593 aaKnown RBP19.67■□□□□ 0.74
VSX1-201ENST00000376707 HNRNPH1P31943 449 aaKnown RBP19.67■□□□□ 0.74
VSX1-201ENST00000376707 HPDP32754 393 aaPredicted RBP19.67■□□□□ 0.74
VSX1-201ENST00000376707 GP5P40197 560 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 HLCSP50747 726 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 PLTPP55058 493 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 GPX6P59796 221 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 ZKSCAN8Q15776 578 aaPredicted RBP19.67■□□□□ 0.74
VSX1-201ENST00000376707 BNC2Q6ZN30 1099 aaPredicted RBP19.67■□□□□ 0.74
VSX1-201ENST00000376707 GPSM1Q86YR5 675 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 SPPL2CQ8IUH8 684 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 B3GNT7Q8NFL0 401 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 MS4A6EQ96DS6 147 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 SEC16BQ96JE7 1060 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 NPLQ9BXD5 320 aaPredicted RBP19.67■□□□□ 0.74
VSX1-201ENST00000376707 GPRC5BQ9NZH0 403 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 ZNF835Q9Y2P0 537 aa19.67■□□□□ 0.74
VSX1-201ENST00000376707 TRBV11-1A0A0K0K1C0 115 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 LRIT2A6NDA9 550 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 ANKDD1BA6NHY2 528 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 CLDN4O14493 209 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 CLGNO14967 610 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 PHGDHO43175 533 aaKnown RBP19.66■□□□□ 0.74
VSX1-201ENST00000376707 ASNA1O43681 348 aa19.66■□□□□ 0.74
VSX1-201ENST00000376707 B3GALT2O43825 422 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms