RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ADORA3P0DMS8 318 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 LAG3P18627 525 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 MAPK9P45984 424 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 SEPHS1P49903 392 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 PNLIPRP1P54315 467 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 NOGQ13253 232 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 SLBPQ14493 270 aaKnown RBP eCLIP13.94□□□□□ -0.18
MSH5-201ENST00000375703 ZNF181Q2M3W8 571 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 C10orf62Q5T681 223 aaPredicted RBP13.94□□□□□ -0.18
MSH5-201ENST00000375703 CCDC80Q76M96 950 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 TECPR1Q7Z6L1 1165 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 RNF130Q86XS8 419 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
MSH5-201ENST00000375703 OXR1Q8N573 874 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 OR5AK3PQ8NH89 298 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 WDR48Q8TAF3 677 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 C16orf78Q8WTQ4 265 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 CYB5D2Q8WUJ1 264 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 GTPBP3Q969Y2 492 aaKnown RBP13.94□□□□□ -0.18
MSH5-201ENST00000375703 CRELD1Q96HD1 420 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 RNF167Q9H6Y7 350 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 GPBP1L1Q9HC44 474 aaPredicted RBP13.94□□□□□ -0.18
MSH5-201ENST00000375703 ACER3Q9NUN7 267 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 OBSL1O75147 1896 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 A8MVJ9 347 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 FOXE1O00358 373 aaPredicted RBP13.94□□□□□ -0.18
MSH5-201ENST00000375703 LILRB3O75022 631 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 IFNA14P01570 189 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 TYRP14679 529 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 FUT4P22083 530 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 S100A5P33763 92 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 RGS6P49758 472 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 TEKQ02763 1124 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 CDC20Q12834 499 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 E2F2Q14209 437 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 EIF4HQ15056 248 aaKnown RBP13.94□□□□□ -0.18
MSH5-201ENST00000375703 SLC5A12Q1EHB4 618 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 SOWAHCQ53LP3 525 aaPredicted RBP13.94□□□□□ -0.18
MSH5-201ENST00000375703 TMEM215Q68D42 235 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 LMNTD1Q8N9Z9 388 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 POC5Q8NA72 575 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 KBTBD8Q8NFY9 601 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 SORCS1Q8WY21 1168 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 HTRA1Q92743 480 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 IRF7Q92985 503 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 AP2M1Q96CW1 435 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 VPS35Q96QK1 796 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 PIP5K1AQ99755 562 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 CDADC1Q9BWV3 514 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 MTG2Q9H4K7 406 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 CPNE5Q9HCH3 593 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 HCN4Q9Y3Q4 1203 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 DYRK1BQ9Y463 629 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 UGT2A1Q9Y4X1 527 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 A3GALT2U3KPV4 340 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 M0R129 80 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 GADD45GO95257 159 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 C8AP07357 584 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 C1GALT1C1LP0DN25 315 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 POLR2EP19388 210 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 CRISP3P54108 245 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 TAS2R50P59544 299 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 TBPL1P62380 186 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 STARD3Q14849 445 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 PTGES3Q15185 160 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 MPEG1Q2M385 716 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 CRB2Q5IJ48 1285 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 CFAP206Q8IYR0 622 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 B3GNT7Q8NFL0 401 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 GEMIN6Q8WXD5 167 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 HHIPL1Q96JK4 782 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 CHCHD6Q9BRQ6 235 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 NXF2Q9GZY0 626 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 LINC00597Q9H2U6 94 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 TRIM39Q9HCM9 518 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 TAS2R9Q9NYW1 312 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 SH2B3Q9UQQ2 575 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 PCDHGA3Q9Y5H0 932 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 PRAMEF33A0A0G2JMD5 474 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 PRAMEF10O60809 474 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 KLK1P06870 262 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 SRPRAP08240 638 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 RPL3P39023 403 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 NNMTP40261 264 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 HMGA2P52926 109 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 OLR1P78380 273 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 EEF1A2Q05639 463 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 GANABQ14697 944 aaKnown RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 ZNF630Q2M218 657 aaPredicted RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 FAM129BQ96TA1 746 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 EFCAB11Q9BUY7 163 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 DMRT3Q9NQL9 472 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 ASAH2Q9NR71 780 aa13.93□□□□□ -0.18
MSH5-201ENST00000375703 NFKBIL1Q9UBC1 381 aaPredicted RBP13.93□□□□□ -0.18
MSH5-201ENST00000375703 RAB23Q9ULC3 237 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms