RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MYO1DO94832 1006 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 TFEBP19484 476 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 CLCN2P51788 898 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 GPR85P60893 370 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 TFF3Q07654 80 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
CXCL12-202ENST00000374426 RNASEH2BQ5TBB1 312 aaKnown RBP12.86□□□□□ -0.35
CXCL12-202ENST00000374426 KIAA0408Q6ZU52 694 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 PPIL6Q8IXY8 311 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 CYP4Z2PQ8N1L4 340 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 CA13Q8N1Q1 262 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 B3GNT7Q8NFL0 401 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 CREB3L4Q8TEY5 395 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 ATL1Q8WXF7 558 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 TRIM54Q9BYV2 358 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 PELI2Q9HAT8 420 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 PLAC1Q9HBJ0 212 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 ACANP16112 2415 aa12.86□□□□□ -0.35
CXCL12-202ENST00000374426 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 URADA6NGE7 173 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 TTC4O95801 387 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 SERPINA6P08185 405 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 ENO2P09104 434 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 CHRNB4P30926 498 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 RBBP5Q15291 538 aaKnown RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 TERF2Q15554 542 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 PPP1R3AQ16821 1122 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 EMC4Q5J8M3 183 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 HECTD2Q5U5R9 776 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 TMEM211Q6ICI0 200 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 NXPE4Q6UWF7 544 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 SBSNQ6UWP8 590 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 GALNT7Q86SF2 657 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 TMPRSS11BQ86T26 416 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 THOC6Q86W42 341 aaKnown RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 IGDCC3Q8IVU1 814 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 SCUBE1Q8IWY4 988 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 TMEM156Q8N614 296 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 OR52N2Q8NGI0 321 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 LILRB4Q8NHJ6 448 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 GABPB2Q8TAK5 448 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 ASB5Q8WWX0 329 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 AIF1LQ9BQI0 150 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 UCK2Q9BZX2 261 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 DEPPQ9NTK1 212 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 FBXW2Q9UKT8 454 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 PPIEQ9UNP9 301 aaKnown RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 MMACHCQ9Y4U1 282 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 CLDN16Q9Y5I7 305 aa12.85□□□□□ -0.35
CXCL12-202ENST00000374426 ANKHD1Q8IWZ3 2542 aaKnown RBP12.85□□□□□ -0.35
CXCL12-202ENST00000374426 HCFC1P51610 2035 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 TGFBR3LH3BV60 316 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 NRDCO43847 1150 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PRKNO60260 465 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PDE9AO76083 593 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 TOXO94900 526 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PPP2R1BP30154 601 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 GPR143P51810 404 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 SPANXN3Q5MJ09 141 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 C16orf47Q6ZP98 133 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-202ENST00000374426 GPATCH11Q8N954 259 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 CERS2Q96G23 380 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PDLIM5Q96HC4 596 aaKnown RBP12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PBKQ96KB5 322 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 TP63Q9H3D4 680 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PNO1Q9NRX1 252 aaKnown RBP12.84□□□□□ -0.35
CXCL12-202ENST00000374426 KCMF1Q9P0J7 381 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 SLC22A14Q9Y267 594 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 VWA7Q9Y334 891 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 DYRK1BQ9Y463 629 aa12.84□□□□□ -0.35
CXCL12-202ENST00000374426 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 TMEM200CA6NKL6 621 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 TUBB4AP04350 444 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 MSX1P28360 303 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 FNTAP49354 379 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 SSR4P51571 173 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 HNRNPFP52597 415 aaKnown RBP12.83□□□□□ -0.36
CXCL12-202ENST00000374426 BTN3A2P78410 334 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 RUNX2Q13950 521 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 CCDC71Q8IV32 467 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-202ENST00000374426 DMRTC2Q8IXT2 367 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-202ENST00000374426 PSD4Q8NDX1 1056 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 RND1Q92730 232 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 NCLNQ969V3 563 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 VMP1Q96GC9 406 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 SEC16BQ96JE7 1060 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 NAT9Q9BTE0 207 aa12.83□□□□□ -0.36
CXCL12-202ENST00000374426 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms