RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CFAP52Q8N1V2 620 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 PTGR2Q8N8N7 351 aaPredicted RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 KLHDC9Q8NEP7 349 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 C9orf43Q8TAL5 461 aaPredicted RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 SEMA3CQ99985 751 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 OSBPL2Q9H1P3 480 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 EXO5Q9H790 373 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CDH10Q9Y6N8 788 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ATG2BQ96BY7 2078 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 hCG_1807616A0A1W2PRN6 198 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RAB3DO95716 219 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 MYF6P23409 242 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 NDST2P52849 883 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CDK10Q15131 360 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RPL13AP3Q6NVV1 102 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 NEPROQ6NW34 567 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 MSANTD2Q6P1R3 559 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 GPRIN3Q6ZVF9 776 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 LRRC70Q7Z2Q7 622 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ATCAYQ86WG3 371 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CAPN10Q9HC96 672 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 DTLQ9NZJ0 730 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 A0A1W2PPL8 197 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 DCLK1O15075 740 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 IFNGP01579 166 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CREB1P16220 341 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 HK1P19367 917 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 WEE1P30291 646 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CORO1AP31146 461 aaKnown RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 HCAR3P49019 387 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 BMXP51813 675 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ESRP1Q6NXG1 681 aaKnown RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 OR1J4Q8NGS1 313 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 FATE1Q969F0 183 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 OR14A2Q96R54 314 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 PAAF1Q9BRP4 392 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 TMED9Q9BVK6 235 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 DNAJB9Q9UBS3 223 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 SULT1C2O00338 296 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CLCN5P51795 746 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 SF3B4Q15427 424 aaKnown RBP eCLIP6.37□□□□□ -1.392e-8■■■■□ 22.8
CHD6-203ENST00000373233 MEP1AQ16819 746 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 NCBP2-AS2Q69YL0 99 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RNF44Q7L0R7 432 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RELL1Q8IUW5 271 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 SLC35B2Q8TB61 432 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CANT1Q8WVQ1 401 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 NCSTNQ92542 709 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 UNKLQ9H9P5 680 aaKnown RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 ARL5AQ9Y689 179 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 IFNA2P01563 188 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ACOX1Q15067 660 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CHST15Q7LFX5 561 aaPredicted RBP6.37□□□□□ -1.39
CHD6-203ENST00000373233 POC1BQ8TC44 478 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 NPY6RQ99463 290 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 OR51J1Q9H342 316 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 C14orf105Q9NVL8 296 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ICKQ9UPZ9 632 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 SHOXO15266 292 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 GRID2O43424 1007 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 BEST1O76090 585 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 TFP02787 698 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 CHATP28329 748 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 TGM4P49221 684 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ZNF616Q08AN1 781 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RABL3Q5HYI8 236 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 FAM209BQ5JX69 171 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 PRAMEF13Q5VWM6 474 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 ZNF852Q6ZMS4 543 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RAD51AP1Q96B01 352 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 HMCESQ96FZ2 354 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 COL21A1Q96P44 957 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 SLAMF7Q9NQ25 335 aa6.37□□□□□ -1.39
CHD6-203ENST00000373233 RIIAD1A6NNX1 92 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ADAM12O43184 909 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 IRAK2O43187 625 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 CD63P08962 238 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 MLLT1Q03111 559 aaPredicted RBP6.36□□□□□ -1.39
CHD6-203ENST00000373233 ACSM2AQ08AH3 577 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 KLF1Q13351 362 aaPredicted RBP6.36□□□□□ -1.39
CHD6-203ENST00000373233 SELPLGQ14242 412 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 RSU1Q15404 277 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ACSM2BQ68CK6 577 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 TCF25Q9BQ70 676 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 MMP28Q9H239 520 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 SMOXQ9NWM0 555 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 C14orf166Q9Y224 244 aaKnown RBP6.36□□□□□ -1.39
CHD6-203ENST00000373233 ABHD14A-ACY1A0A1B0GW23 586 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 A0A1W2PRQ8 180 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ANKDD1BA6NHY2 528 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 hCG_2039718K7EN88 272 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 CXCR6O00574 342 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 FGBP02675 491 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 EPB42P16452 691 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 M6PRP20645 277 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 AQP1P29972 269 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 CXCR3P49682 368 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 WNT3AP56704 352 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms