RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 KLHL42Q9P2K6 505 aa14.31□□□□□ -0.12
SSR4-204ENST00000370087 DRG1Q9Y295 367 aaKnown RBP14.31□□□□□ -0.12
SSR4-204ENST00000370087 FN1P02751 2386 aaKnown RBP14.31□□□□□ -0.12
SSR4-204ENST00000370087 OR1F1O43749 312 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 GLSO94925 669 aaPredicted RBP14.3□□□□□ -0.12
SSR4-204ENST00000370087 OR6B1O95007 311 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 ENO3P13929 434 aaPredicted RBP14.3□□□□□ -0.12
SSR4-204ENST00000370087 NPPBP16860 134 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 GPR143P51810 404 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 RAB8AP61006 207 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 TIAL1Q01085 375 aaKnown RBP eCLIP14.3□□□□□ -0.12
SSR4-204ENST00000370087 PLGLB1Q02325 96 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 PAMR1Q6UXH9 720 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 B3GNT6Q6ZMB0 384 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 KIAA0408Q6ZU52 694 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 KRTAP1-3Q8IUG1 177 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 OR4K1Q8NGD4 311 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 NT5CQ8TCD5 201 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 UTP15Q8TED0 518 aaKnown RBP14.3□□□□□ -0.12
SSR4-204ENST00000370087 NCLNQ969V3 563 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 PYCR2Q96C36 320 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 PDLIM2Q96JY6 352 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 OR4K3Q96R72 315 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 CNPPD1Q9BV87 410 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 PCBD2Q9H0N5 130 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 KLHL31Q9H511 634 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 GRPEL1Q9HAV7 217 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 SLC24A3Q9HC58 644 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 TIMMDC1Q9NPL8 285 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 TRMT1Q9NXH9 659 aaKnown RBP14.3□□□□□ -0.12
SSR4-204ENST00000370087 CLDN16Q9Y5I7 305 aa14.3□□□□□ -0.12
SSR4-204ENST00000370087 CTAGE9A4FU28 777 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 PFDN6O15212 129 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 NRDCO43847 1150 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 OR2J2O76002 312 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 IGHG3P01860 377 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 HNF4AP41235 474 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 SLC1A2P43004 574 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 MAGEA5P43359 124 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 KIR2DL3P43628 341 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 SSR4P51571 173 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 CLCN2P51788 898 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 DGKQP52824 942 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 PWP1Q13610 501 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 PHKG1Q16816 387 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 CATSPEREQ5SY80 951 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 TMEM198Q66K66 360 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 TRILQ7L0X0 811 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 WDR53Q7Z5U6 358 aaPredicted RBP14.29□□□□□ -0.12
SSR4-204ENST00000370087 SYCE1Q8N0S2 351 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 CA13Q8N1Q1 262 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 TMEM251Q8N6I4 163 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 SPC24Q8NBT2 197 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 TMEM52Q8NDY8 209 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 ABHD11Q8NFV4 315 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 MYRIPQ8NFW9 859 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 MBD6Q96DN6 1003 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 MDFIQ99750 246 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 SARGQ9BW04 601 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 FAM129AQ9BZQ8 928 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 CBLCQ9ULV8 474 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 ERVK-11Q9UQG0 969 aa14.29□□□□□ -0.12
SSR4-204ENST00000370087 TRBC2A0A5B9 178 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 FIGNL2A6NMB9 653 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 A6NNC1 897 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 BCKDKO14874 412 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 ATE1O95260 518 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 ENDOUP21128 410 aaKnown RBP14.28□□□□□ -0.12
SSR4-204ENST00000370087 GRK3P35626 688 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 SOX3P41225 446 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 CCR8P51685 355 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 HNRNPFP52597 415 aaKnown RBP14.28□□□□□ -0.12
SSR4-204ENST00000370087 C1orf185Q5T7R7 199 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 SEL1L2Q5TEA6 688 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 PAOXQ6QHF9 649 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 IL20RBQ6UXL0 311 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 KIAA1328Q86T90 577 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 BIVMQ86UB2 503 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 PRIMA1Q86XR5 153 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 ANKRD53Q8N9V6 530 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 RELL2Q8NC24 303 aaPredicted RBP14.28□□□□□ -0.12
SSR4-204ENST00000370087 CREB3L4Q8TEY5 395 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 EEF1AKMT1Q8WVE0 214 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 ZNF669Q96BR6 464 aaPredicted RBP14.28□□□□□ -0.12
SSR4-204ENST00000370087 VMP1Q96GC9 406 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 KIAA1549Q9HCM3 1950 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 PNO1Q9NRX1 252 aaKnown RBP14.28□□□□□ -0.12
SSR4-204ENST00000370087 SPRR3Q9UBC9 169 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 PPIEQ9UNP9 301 aaKnown RBP14.28□□□□□ -0.12
SSR4-204ENST00000370087 VPS9D1Q9Y2B5 631 aa14.28□□□□□ -0.12
SSR4-204ENST00000370087 A0A1B0GVC2 190 aa14.27□□□□□ -0.13
SSR4-204ENST00000370087 OR14I1A6ND48 311 aa14.27□□□□□ -0.13
SSR4-204ENST00000370087 A8MVJ9 347 aa14.27□□□□□ -0.13
SSR4-204ENST00000370087 KIAA1324LA8MWY0 1029 aaPredicted RBP14.27□□□□□ -0.13
SSR4-204ENST00000370087 KDM4EB2RXH2 506 aaPredicted RBP14.27□□□□□ -0.13
SSR4-204ENST00000370087 ACOT7O00154 380 aa14.27□□□□□ -0.13
SSR4-204ENST00000370087 ZNF354AO60765 605 aaPredicted RBP14.27□□□□□ -0.13
SSR4-204ENST00000370087 SMIM10L1P0DMW3 83 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms