RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C1orf21Q9H246 121 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.42□□□□□ -1.06
TPM3-213ENST00000368545 ZNF225Q9UK10 706 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 DCHS1Q96JQ0 3298 aa8.42□□□□□ -1.06
TPM3-213ENST00000368545 TOR1BO14657 336 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 WDR47O94967 919 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 C1orf105O95561 183 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 IGLV3-19P01714 112 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 RPN2P04844 631 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 NQO1P15559 274 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 HMOX2P30519 316 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 KIAA1024LP59773 190 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 ERVPABLB-1P60509 514 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 STX1BP61266 288 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 PPP2CBP62714 309 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 PPP2CAP67775 309 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 DMPKQ09013 629 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 DBPQ10586 325 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 ABRQ12979 859 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 KLF10Q13118 480 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 HERC3Q15034 1050 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 C18orf21Q32NC0 220 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 XKR7Q5GH72 579 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 LYSMD4Q5XG99 296 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 OGFOD2Q6N063 350 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 NAXDQ8IW45 347 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 ARHGAP24Q8N264 748 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 LILRA3Q8N6C8 439 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 CDYL2Q8N8U2 506 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 OR4F6Q8NGB9 312 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 METTL6Q8TCB7 284 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 HMGB4Q8WW32 186 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 MTFMTQ96DP5 389 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 CATSPER2Q96P56 530 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 TIMM29Q9BSF4 260 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 BTBD10Q9BSF8 475 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 SLC29A3Q9BZD2 475 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 DNAJC11Q9NVH1 559 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 LRFN1Q9P244 771 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 POLG2Q9UHN1 485 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 SLC17A4Q9Y2C5 497 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 TMEM98Q9Y2Y6 226 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 OR1A2Q9Y585 309 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 A0A1B0GTL3 188 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 GYG2O15488 501 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 UGDHO60701 494 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 MPIG6BO95866 241 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 PRB1P04280 392 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 CAPN1P07384 714 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 THRAP10827 490 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 LBPP18428 481 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 HNRNPA2B1P22626 353 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 KELP23276 732 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 PDHA2P29803 388 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 PRDX3P30048 256 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 GDF5P43026 501 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 DHPSP49366 369 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 SUMO3P55854 103 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 NFE2L1Q14494 772 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 NAA25Q14CX7 972 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 MAPRE2Q15555 327 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 PTCHD3Q3KNS1 767 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 DNAL1Q4LDG9 190 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 FAM124AQ86V42 546 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 TSTD1Q8NFU3 115 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 CFAP61Q8NHU2 1237 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 RP9Q8TA86 221 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 PIGKQ92643 395 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 KLK6Q92876 244 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 TUBGCP3Q96CW5 907 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 VRK1Q99986 396 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 APOOQ9BUR5 198 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 OR52A5Q9H2C5 316 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 TUBB1Q9H4B7 451 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 CNTD2Q9H8S5 307 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 STOX2Q9P2F5 926 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 IFT80Q9P2H3 777 aaPredicted RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 ACSL5Q9ULC5 683 aa8.41□□□□□ -1.06
TPM3-213ENST00000368545 COPG1Q9Y678 874 aaKnown RBP8.41□□□□□ -1.06
TPM3-213ENST00000368545 A6NCN8 305 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 ISM1B1AKI9 464 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 FPGTO14772 594 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 SLC28A2O43868 658 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 CLDN9O95484 217 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 CD59P13987 128 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 CAPN3P20807 821 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 PIK3R1P27986 724 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 ACADLP28330 430 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 MAT2AP31153 395 aaKnown RBP8.4□□□□□ -1.06
TPM3-213ENST00000368545 BDKRB1P46663 353 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 ZNF33BQ06732 778 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 GSTA3Q16772 222 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 METRNLQ641Q3 311 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 TMEM198Q66K66 360 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 Q6ZS52 159 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 SPATA19Q7Z5L4 167 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 GALNT13Q8IUC8 556 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 SNX31Q8N9S9 440 aa8.4□□□□□ -1.06
TPM3-213ENST00000368545 OR56A3Q8NH54 315 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms