RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 NCS1P62166 190 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 GPR68Q15743 365 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 SMU1Q2TAY7 513 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 NADSYN1Q6IA69 706 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 JAZF1Q86VZ6 243 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 PRAP1Q96NZ9 151 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 FEVQ99581 238 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 CARS2Q9HA77 564 aaKnown RBP11.25□□□□□ -0.61
COPA-202ENST00000368069 USP22Q9UPT9 525 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 KCNK6Q9Y257 313 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 CCRL2O00421 344 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 TEX28O15482 410 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 HMGN1P05114 100 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 ZSWIM9Q86XI8 627 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 IL17FQ96PD4 163 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 RTP3Q9BQQ7 232 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 EHD1Q9H4M9 534 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 HSPE1-MOB4S4R3N1 261 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 TTC34A8MYJ7 566 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 E7EQ34 232 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 HCN1O60741 890 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 SLC2A2P11168 524 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 CKMT1AP12532 417 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 MATN1P21941 496 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 ARNTP27540 789 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 CSTF1Q05048 431 aaKnown RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 SELPLGQ14242 412 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 TOR1AIP1Q5JTV8 583 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 C10orf62Q5T681 223 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 POMZP3Q6PJE2 187 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ZNF367Q7RTV3 350 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 MFSD6LQ8IWD5 586 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 LINC00471Q8N535 108 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 MAELQ96JY0 434 aaKnown RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 C17orf62Q9BQA9 187 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 SPATA9Q9BWV2 254 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 RNF186Q9NXI6 227 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 PRSS21Q9Y6M0 314 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 GNB5O14775 395 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 AKAP8O43823 692 aaKnown RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 SRCP12931 536 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 HOXC13P31276 330 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ACTR1BP42025 376 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ACTR1AP61163 376 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ZNF517Q6ZMY9 492 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 MSANTD1Q6ZTZ1 278 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 PELI3Q8N2H9 469 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 CHST14Q8NCH0 376 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 GPR26Q8NDV2 337 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ABHD11Q8NFV4 315 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 TMED9Q9BVK6 235 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 TSSK6Q9BXA6 273 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 DCAF13Q9NV06 445 aaKnown RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 RWDD3Q9Y3V2 267 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 HEBP2Q9Y5Z4 205 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ZNF701M0R085 212 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 PRAMEF12O95522 483 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ZNF26P17031 533 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 SDC1P18827 310 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 KCNC1P48547 511 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 CDH11P55287 796 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 RPS26P62854 115 aaKnown RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 BTN3A2P78410 334 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 NDUFA9Q16795 377 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 RUNDC3AQ59EK9 446 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 HERVK_113Q902F9 699 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 MIR1-1HGQ9H1L0 117 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 AKAP7Q9P0M2 348 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 TNFRSF10DQ9UBN6 386 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 INSL6Q9Y581 213 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 TNFRSF1BP20333 461 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 CD9P21926 228 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 HOXD9P28356 352 aaPredicted RBP11.24□□□□□ -0.61
COPA-202ENST00000368069 CDK5R2Q13319 367 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ADNP2Q6IQ32 1131 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 FRRS1Q6ZNA5 592 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 TAS1R1Q7RTX1 841 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 FIBINQ8TAL6 211 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ZFP3Q96NJ6 502 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ASPNQ9BXN1 380 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 ACPTQ9BZG2 426 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 MSRAQ9UJ68 235 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
COPA-202ENST00000368069 PRAMEF33A0A0G2JMD5 474 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 FAM92AA1XBS5 289 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 PLOD2O00469 737 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 LSM1O15116 133 aaKnown RBP11.23□□□□□ -0.61
COPA-202ENST00000368069 PRAMEF10O60809 474 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 BCAS1O75363 584 aaPredicted RBP11.23□□□□□ -0.61
COPA-202ENST00000368069 ALPPL2P10696 532 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 DPP6P42658 865 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 TAF13Q15543 124 aa11.23□□□□□ -0.61
COPA-202ENST00000368069 TSPYL5Q86VY4 417 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms